Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.52-201ENST00000362760 96 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-1210P-201ENST00000363775 107 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP283-201ENST00000365604 119 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-49P-201ENST00000384256 107 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 RN7SKP202-201ENST00000410439 330 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 SNORA84-201ENST00000459229 133 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 AC097639.2-201ENST00000603159 172 ntBASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AL596211.1-201ENST00000569873 2277 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AC000403.1-201ENST00000613696 3585 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 snoU2_19.1-201ENST00000362361 80 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.328-201ENST00000365208 113 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-756P-201ENST00000383997 107 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.558-201ENST00000384685 113 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 MIR1263-201ENST00000408324 86 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AL645939.1-201ENST00000453429 797 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-63P-201ENST00000516690 95 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 PRELID2P1-201ENST00000552837 301 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AC006130.2-201ENST00000586202 326 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AC012493.2-201ENST00000595083 291 ntBASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
LYSMD3Q7Z3D4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 USP8P1-201ENST00000494673 3183 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-655P-201ENST00000362858 107 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 RNU6-271P-201ENST00000363858 105 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP399-201ENST00000364003 117 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 AL359837.1-201ENST00000381357 287 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 AL441985.1-201ENST00000457727 251 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 S100A11P1-201ENST00000477525 312 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 SNORD77.4-201ENST00000516158 81 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 SNORA18.4-201ENST00000516440 124 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 uc_338.4-201ENST00000616635 176 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 AC026241.1-201ENST00000517873 2142 ntBASIC4□□□□□ -1.77
LYSMD3Q7Z3D4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.85-201ENST00000363014 111 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 RNA5SP125-201ENST00000364843 120 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 MIR891A-201ENST00000401237 79 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 MIR1251-201ENST00000408552 70 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AL021397.1-201ENST00000451806 248 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 RBMY2UP-201ENST00000453474 324 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 SNORD65B-201ENST00000459126 73 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 RN7SL271P-201ENST00000487601 295 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 RN7SKP289-201ENST00000517244 295 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC007012.1-201ENST00000567192 175 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC009831.4-201ENST00000620744 325 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AL136360.1-201ENST00000503377 1900 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC103988.1-201ENST00000566382 2177 ntBASIC3.99□□□□□ -1.77
LYSMD3Q7Z3D4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 Y_RNA.163-201ENST00000363702 113 ntBASIC3.98□□□□□ -1.77
LYSMD3Q7Z3D4 SNORA51.5-201ENST00000384126 131 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms