Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR548B-201ENST00000385247 97 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-1.07□□□□□ -2.58
VPS13CQ709C8 AC093850.1-201ENST00000454121 251 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 AC004223.4-201ENST00000612426 332 ntBASIC-1.07□□□□□ -2.58
VPS13CQ709C8 RNU5A-1-201ENST00000362698 116 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 RNA5SP493-201ENST00000364115 91 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 SCARNA18B-201ENST00000458806 135 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 RNU6-1095P-201ENST00000516148 108 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 SNORA24.1-201ENST00000384401 135 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 RNA5SP33-201ENST00000516687 98 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 TPRKBP2-201ENST00000565969 475 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 AL663109.1-201ENST00000411498 844 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 SNORD60.2-201ENST00000516883 86 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.08□□□□□ -2.58
VPS13CQ709C8 AC093249.1-201ENST00000567049 203 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 MIR5695-201ENST00000579717 85 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 MIR3152-201ENST00000579801 74 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 FGF7P1-201ENST00000582820 288 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 POLR3GP2-201ENST00000588366 668 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.08□□□□□ -2.58
VPS13CQ709C8 AC080188.3-201ENST00000624842 748 ntBASIC-1.08□□□□□ -2.58
VPS13CQ709C8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 MIR655-201ENST00000362159 97 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 RNU6-140P-201ENST00000384566 108 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC023827.1-201ENST00000569247 97 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 MIR5692A1-201ENST00000580523 69 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 ZNF885P-201ENST00000420174 1098 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 SCARNA15.2-201ENST00000516409 127 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 SNORA18.4-201ENST00000516440 124 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 U8.15-201ENST00000390947 134 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC007014.2-201ENST00000615581 479 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AC009318.4-201ENST00000620496 486 ntBASIC-1.09□□□□□ -2.58
VPS13CQ709C8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.1□□□□□ -2.59
VPS13CQ709C8 MTCO2P1-201ENST00000424648 477 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 SNORA25.11-201ENST00000515935 105 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 RNU6-743P-201ENST00000364151 106 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
VPS13CQ709C8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 MTCO3P9-201ENST00000506989 781 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 RNU6-965P-201ENST00000516721 96 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 SUMO2P18-201ENST00000518873 252 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 AC026421.1-201ENST00000519101 163 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 BNIP3P6-201ENST00000549284 499 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 AL353997.4-201ENST00000586196 166 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 AC080078.2-201ENST00000603766 501 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 AC120349.3-201ENST00000624377 529 ntBASIC-1.1□□□□□ -2.59
VPS13CQ709C8 SNORA72.2-201ENST00000365028 127 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 USP9YP22-201ENST00000438971 294 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AL391903.3-201ENST00000612158 163 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC017104.5-201ENST00000637647 639 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AL133217.1-201ENST00000450980 425 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 RNU1-86P-201ENST00000516108 154 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 RNU1-107P-201ENST00000516617 154 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 RNU2-46P-201ENST00000517038 113 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 SNORD115-42-201ENST00000364273 82 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 RNU4-28P-201ENST00000364739 141 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 MIR653-201ENST00000385279 96 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 RNA5SP261-201ENST00000410536 106 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AL162725.1-201ENST00000435405 301 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC093259.1-201ENST00000509755 300 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 AC011458.1-201ENST00000604034 617 ntBASIC-1.11□□□□□ -2.59
VPS13CQ709C8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-1.12□□□□□ -2.59
VPS13CQ709C8 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 RPL26P6-201ENST00000440913 438 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-1.12□□□□□ -2.59
VPS13CQ709C8 AL022067.1-201ENST00000602426 454 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 AL365184.2-201ENST00000431139 435 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 MRPS10P2-201ENST00000431226 381 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 RNU6-118P-201ENST00000516552 102 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 DEFB108D-201ENST00000527787 222 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 RNU6-374P-201ENST00000364146 108 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-1.12□□□□□ -2.59
VPS13CQ709C8 RNU6-333P-201ENST00000459117 107 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 AL109620.1-201ENST00000618738 1197 ntBASIC-1.12□□□□□ -2.59
VPS13CQ709C8 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 BEND7P1-201ENST00000422058 457 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 CALM2P2-201ENST00000428512 440 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-1.13□□□□□ -2.59
VPS13CQ709C8 RNA5SP169-201ENST00000517268 117 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
VPS13CQ709C8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 RNU6-581P-201ENST00000516214 105 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 RNU6-980P-201ENST00000516925 103 ntBASIC-1.13□□□□□ -2.59
VPS13CQ709C8 MTND4P33-201ENST00000556706 766 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms