Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC093019.1-201ENST00000443135 252 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 snoU13.8-201ENST00000458890 104 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU1-86P-201ENST00000516108 154 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU1-107P-201ENST00000516617 154 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 SUB1P2-201ENST00000556401 297 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL133153.1-201ENST00000557756 303 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 MIR1273C-201ENST00000578669 77 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RN7SL660P-201ENST00000614852 299 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU6-395P-201ENST00000365662 106 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU6-756P-201ENST00000383997 107 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU2-12P-201ENST00000517216 168 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 SNRPGP1-201ENST00000553864 222 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC087685.1-201ENST00000587507 141 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC004832.4-201ENST00000608952 331 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC005332.6-201ENST00000613178 446 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 uc_338.16-201ENST00000621804 95 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU6-199P-201ENST00000362954 107 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AL079342.2-201ENST00000403367 482 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 MTCO2P5-201ENST00000422621 426 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC073910.1-201ENST00000445047 438 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 MRPL42P4-201ENST00000453267 443 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC074133.1-201ENST00000515696 183 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 ZNF321P-202ENST00000550843 495 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC091135.1-201ENST00000585943 307 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC092447.9-201ENST00000603395 144 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 BNIP3P9-201ENST00000603714 553 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 AC104985.3-201ENST00000623479 597 ntBASIC-0.26□□□□□ -2.45
CSPG4Q6UVK1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RNU6-343P-201ENST00000364709 104 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 MIR587-201ENST00000384845 96 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RPL37P6-201ENST00000460682 294 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC093809.1-201ENST00000509155 340 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RNU6-143P-201ENST00000516942 93 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC115989.2-201ENST00000578640 563 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 MIR4743-201ENST00000584576 69 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC107905.1-201ENST00000616204 426 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 BX322639.1-202ENST00000423987 2213 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RPS20P2-201ENST00000402520 389 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RN7SKP266-201ENST00000410232 287 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC093850.1-201ENST00000454121 251 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RNU4-49P-201ENST00000516080 140 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 MTND2P7-201ENST00000521337 640 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 MIR4804-201ENST00000581683 73 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 AC018889.1-201ENST00000605372 397 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RMST_10.1-201ENST00000616309 154 ntBASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.27□□□□□ -2.45
CSPG4Q6UVK1 RNU4-15P-201ENST00000362613 141 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RNU6-78P-201ENST00000362897 107 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 SNORD32B-201ENST00000364460 84 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 MIR593-201ENST00000384856 100 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 MIR1283-1-201ENST00000408494 87 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RNU6-57P-201ENST00000411348 103 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 AC068533.2-201ENST00000411872 306 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RNU7-136P-201ENST00000458819 69 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 snoU109.2-201ENST00000459316 135 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RPS23P5-201ENST00000495419 428 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 AC103706.2-201ENST00000638080 240 ntBASIC-0.28□□□□□ -2.45
CSPG4Q6UVK1 MIR196A2-201ENST00000385189 110 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MIR891A-201ENST00000401237 79 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 RNU6-735P-201ENST00000410612 107 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC006366.1-201ENST00000422002 759 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 MTND4P24-201ENST00000424002 397 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC002542.1-201ENST00000440683 193 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 RPS29P15-201ENST00000458329 171 ntBASIC-0.29□□□□□ -2.46
CSPG4Q6UVK1 AC024995.1-201ENST00000523014 93 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms