Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 OR5AK4P-201ENST00000635912 903 ntBASIC1.29□□□□□ -2.2
TRIM40Q6P9F5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRIM40Q6P9F5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNU6-418P-201ENST00000384035 107 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNU6-968P-201ENST00000384076 107 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 SNORD116-1-201ENST00000384335 95 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 FGF7P8-201ENST00000402994 292 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNU6-325P-201ENST00000411132 105 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 C8orf59P1-201ENST00000429930 303 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 HSPE1P9-201ENST00000440046 311 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AC009474.2-201ENST00000451383 136 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 snoU13.30-201ENST00000458951 104 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RPL26P26-201ENST00000480251 434 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MTCO1P29-201ENST00000496868 288 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RNA5SP437-201ENST00000517249 129 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MRPS36P4-201ENST00000534436 298 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 SUB1P3-201ENST00000564581 315 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 SNORA77B-201ENST00000578179 125 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 CPDP1-201ENST00000579660 283 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AC100830.2-201ENST00000581636 240 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MIR4753-201ENST00000585119 83 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 snoU13.31-201ENST00000607291 104 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AC104458.1-201ENST00000608243 463 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 MIR8076-201ENST00000611401 83 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 RMST_3.1-201ENST00000611651 109 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 Z99129.1-201ENST00000612510 255 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 FAM157A-202ENST00000615155 405 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AL359880.1-201ENST00000621879 266 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AL359697.1-201ENST00000624879 587 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 AC010615.1-201ENST00000594254 1764 ntBASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRIM40Q6P9F5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
TRIM40Q6P9F5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RNU1-96P-201ENST00000364163 162 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 Y_RNA.231-201ENST00000364358 102 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RNU6-360P-201ENST00000390944 104 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 CALM2P3-201ENST00000400429 449 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AL117342.1-201ENST00000404861 406 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 USP9YP14-201ENST00000430663 563 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 JTBP1-201ENST00000441314 247 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC004386.2-201ENST00000441858 148 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RNU1-123P-201ENST00000458950 160 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RPL36AP21-201ENST00000490372 323 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 Y_RNA.693-201ENST00000516641 110 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 RNU6-1332P-201ENST00000516666 104 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 MIR5006-201ENST00000583027 110 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC023043.2-201ENST00000589678 1026 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AC004492.1-201ENST00000607036 742 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
TRIM40Q6P9F5 BX322639.1-202ENST00000423987 2213 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 Y_RNA.51-201ENST00000362725 102 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 SNORA63D-201ENST00000364359 132 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 RNU6-522P-201ENST00000364497 107 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 SNRPEP10-201ENST00000420249 274 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC060773.1-201ENST00000421698 310 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 MTCO1P20-201ENST00000425366 358 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 FTH1P12-201ENST00000432137 551 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC009237.7-201ENST00000447357 229 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 OR2AQ1P-201ENST00000451972 200 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 HMGN2P9-201ENST00000476875 229 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AF186996.7-201ENST00000492781 209 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC011406.1-201ENST00000512440 370 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC108729.3-201ENST00000513484 108 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 MTND2P38-201ENST00000522536 667 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 MIR4498-201ENST00000577599 66 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 AP000907.4-201ENST00000604143 237 ntBASIC1.26□□□□□ -2.21
TRIM40Q6P9F5 RNU6-89P-201ENST00000606519 100 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms