Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORA76.2-201ENST00000517095 137 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC115990.1-201ENST00000526957 301 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC021231.3-201ENST00000558497 370 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 SNORA18.1-201ENST00000363418 128 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 SNORD115-24-201ENST00000363528 82 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 RNA5SP128-201ENST00000365305 116 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 MIR106A-201ENST00000384870 81 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 RNU6-953P-201ENST00000459154 107 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 snoU13.21-201ENST00000459368 105 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 AC114811.1-201ENST00000507207 168 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 AC112187.2-201ENST00000604345 283 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 AC004832.4-201ENST00000608952 331 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.45□□□□□ -2.48
NUP188Q5SRE5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 RBBP4P6-201ENST00000508098 202 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 AC087883.1-201ENST00000551882 391 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 AL391903.3-201ENST00000612158 163 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 AL157770.1-201ENST00000623049 439 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 AC112204.3-201ENST00000623822 332 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 MIR6079-201ENST00000635807 62 ntBASIC-0.46□□□□□ -2.48
NUP188Q5SRE5 RNU4-56P-201ENST00000364700 142 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 RNU6-343P-201ENST00000364709 104 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 AL079342.2-201ENST00000403367 482 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 AC007969.2-201ENST00000441891 191 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 MTCO2P7-201ENST00000446518 666 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 RNU4-49P-201ENST00000516080 140 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 SNORA43.2-201ENST00000516652 128 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 MIR3192-201ENST00000584920 77 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 RPL17P51-201ENST00000605218 238 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 PART1_2.1-201ENST00000612397 250 ntBASIC-0.47□□□□□ -2.48
NUP188Q5SRE5 MIR412-201ENST00000362142 91 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 RNU6-545P-201ENST00000362681 104 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 SNORD114-5-201ENST00000362928 70 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 SNORA32.2-201ENST00000384049 122 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR892B-201ENST00000401279 77 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 RNA5SP201-201ENST00000410316 124 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 RNU2-59P-201ENST00000410482 191 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 RNU4-63P-201ENST00000411313 118 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MTATP6P16-201ENST00000434543 526 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MTND2P20-201ENST00000440805 661 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MTCO3P9-201ENST00000506989 781 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 SNORA31.10-201ENST00000516482 106 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 IGKV1-22-201ENST00000524313 326 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 TMF1P1-201ENST00000576058 373 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR4300-201ENST00000581016 96 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR4293-201ENST00000584305 78 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR4743-201ENST00000584576 69 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR15A-201ENST00000607334 83 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 MIR8064-201ENST00000612863 90 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 AC015726.2-201ENST00000620112 122 ntBASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.47□□□□□ -2.49
NUP188Q5SRE5 RNU6-527P-201ENST00000363425 104 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 SNORD115-41-201ENST00000363608 82 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 RNU6-395P-201ENST00000365662 106 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 AL590623.1-201ENST00000427864 105 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 SUMO2P5-201ENST00000506790 245 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 RN7SKP287-201ENST00000516546 266 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 AC007751.1-201ENST00000529260 376 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 MIR3923-201ENST00000579521 83 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 AC022893.3-201ENST00000607665 437 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 MTND5P42-201ENST00000637720 498 ntBASIC-0.48□□□□□ -2.49
NUP188Q5SRE5 BX322639.1-202ENST00000423987 2213 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 MIR660-201ENST00000385235 97 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 RN7SKP266-201ENST00000410232 287 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 RNU4-22P-201ENST00000411058 166 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 SNORD71-201ENST00000411292 86 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 RNU6-948P-201ENST00000516374 107 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 RNU6-856P-201ENST00000516959 98 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AL138889.2-201ENST00000603883 242 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 MIR8076-201ENST00000611401 83 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 AL356596.1-201ENST00000624230 379 ntBASIC-0.49□□□□□ -2.49
NUP188Q5SRE5 RNU6-549P-201ENST00000384433 107 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 RNA5SP109-201ENST00000391010 116 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 SNORD4A-201ENST00000459174 72 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 DEFB108A-201ENST00000530110 222 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 AC009712.1-201ENST00000564938 316 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 AC012507.3-201ENST00000603556 477 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.5□□□□□ -2.49
NUP188Q5SRE5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms