Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.05□□□□□ -1.92
SF3B3Q15393 MIR5571-201ENST00000577998 113 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC103810.1-201ENST00000579873 453 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AL355877.2-201ENST00000603670 358 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AC103810.6-201ENST00000606708 136 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 AL442067.1-201ENST00000613261 223 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 ADAM3A-203ENST00000461344 2157 ntBASIC3.05□□□□□ -1.92
SF3B3Q15393 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SF3B3Q15393 RNU6-1141P-201ENST00000364520 107 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR544A-201ENST00000384855 91 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR32-201ENST00000384965 70 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR153-2-201ENST00000385225 87 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 RNA5SP210-201ENST00000391034 120 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 RN7SKP223-201ENST00000410582 62 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.04□□□□□ -1.92
SF3B3Q15393 AC092427.1-202ENST00000430569 476 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AL714022.1-201ENST00000439897 151 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 snoU13.15-201ENST00000459407 104 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 TRBVB-201ENST00000477100 408 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 RPS29P21-201ENST00000496272 170 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AC107222.1-201ENST00000510899 637 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.04□□□□□ -1.92
SF3B3Q15393 RNU6-1012P-201ENST00000516606 109 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 Y_RNA.713-201ENST00000517013 96 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR3128-201ENST00000581957 66 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.04□□□□□ -1.92
SF3B3Q15393 AC096772.1-201ENST00000609146 564 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 UCA1.1-201ENST00000620952 75 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 MIR3529-201ENST00000637713 78 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 HAUS6P2-201ENST00000433254 2404 ntBASIC3.04□□□□□ -1.92
SF3B3Q15393 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.04□□□□□ -1.92
SF3B3Q15393 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SF3B3Q15393 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SF3B3Q15393 RNA5SP432-201ENST00000362480 116 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 VTRNA1-1-201ENST00000363120 99 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RNU6-487P-201ENST00000365430 104 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RNU6-142P-201ENST00000384019 107 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 Y_RNA.439-201ENST00000384119 94 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 U8.10-201ENST00000384260 133 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RNU6-622P-201ENST00000384272 103 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 SNORD115-46-201ENST00000390982 71 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RNU1-139P-201ENST00000391307 165 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RNA5SP425-201ENST00000410336 112 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 RN7SKP61-201ENST00000410642 295 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 EIF1P2-201ENST00000428233 350 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
SF3B3Q15393 RNU6-1023P-201ENST00000516137 106 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 ACA59.2-201ENST00000517061 156 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 AC007375.1-201ENST00000554513 578 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 AC136932.1-201ENST00000574771 208 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SF3B3Q15393 AC046143.2-201ENST00000609789 160 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.03□□□□□ -1.92
SF3B3Q15393 AC240442.1-201ENST00000616055 283 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 AC078938.1-201ENST00000620993 318 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 AL450472.1-202ENST00000637286 180 ntBASIC3.03□□□□□ -1.92
SF3B3Q15393 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B3Q15393 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SF3B3Q15393 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B3Q15393 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B3Q15393 RNU6-212P-201ENST00000362642 104 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 Y_RNA.84-201ENST00000363011 104 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 Y_RNA.504-201ENST00000384481 104 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 RNU6-1093P-201ENST00000391194 107 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B3Q15393 RNU6-1203P-201ENST00000410703 110 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AC023141.4-201ENST00000412031 328 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AL135786.1-201ENST00000415892 214 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.02□□□□□ -1.93
SF3B3Q15393 AL356320.1-201ENST00000429616 163 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 Z98949.2-201ENST00000440996 144 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AC016700.2-201ENST00000446011 156 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 RPL39P38-201ENST00000467018 153 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AP000870.1-201ENST00000472927 406 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 RPL31P41-201ENST00000477967 372 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.02□□□□□ -1.93
SF3B3Q15393 AC022868.1-201ENST00000517767 391 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B3Q15393 HSPE1P4-201ENST00000550617 308 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B3Q15393 MIR4300-201ENST00000581016 96 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B3Q15393 AP001282.2-201ENST00000616149 309 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 SDR42E1P4-201ENST00000620894 481 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 MIR1291-201ENST00000627649 87 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B3Q15393 MTND5P6-201ENST00000422338 1798 ntBASIC3.02□□□□□ -1.93
SF3B3Q15393 LINC02555-201ENST00000563933 1951 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.01□□□□□ -1.93
SF3B3Q15393 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.01□□□□□ -1.93
SF3B3Q15393 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.01□□□□□ -1.93
SF3B3Q15393 Y_RNA.60-201ENST00000362831 98 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 snoU2_19.2-201ENST00000363024 80 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 SNORD114-30-201ENST00000364448 72 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 RNU6-318P-201ENST00000384283 103 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 Y_RNA.552-201ENST00000384665 112 ntBASIC3.01□□□□□ -1.93
SF3B3Q15393 MIR215-201ENST00000384858 110 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms