Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AC107626.1-201ENST00000471084 183 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AP004217.1-201ENST00000480579 346 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1I3Q14994 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1I3Q14994 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR1I3Q14994 RNU6-436P-201ENST00000516171 114 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1I3Q14994 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NR1I3Q14994 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.36□□□□□ -1.87
NR1I3Q14994 AC105137.2-201ENST00000569073 466 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.36□□□□□ -1.87
NR1I3Q14994 MIR3923-201ENST00000579521 83 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 MIR3136-201ENST00000583498 78 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AC011471.1-201ENST00000585766 187 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 SNRPGP20-201ENST00000604477 205 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AL137843.1-201ENST00000605078 385 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 XIST_intron.1-201ENST00000619444 68 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 AC091895.1-201ENST00000624494 256 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.36□□□□□ -1.87
NR1I3Q14994 AL672296.1-201ENST00000427780 2158 ntBASIC3.36□□□□□ -1.87
NR1I3Q14994 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR1I3Q14994 AL035425.3-201ENST00000564206 4996 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NR1I3Q14994 RNU4-17P-201ENST00000365598 141 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1I3Q14994 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 Y_RNA.488-201ENST00000384403 102 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 RNU2-49P-201ENST00000410666 184 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1I3Q14994 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1I3Q14994 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1I3Q14994 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.35□□□□□ -1.87
NR1I3Q14994 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NR1I3Q14994 RPS4XP13-201ENST00000483219 789 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 RN7SL633P-201ENST00000488974 297 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.35□□□□□ -1.87
NR1I3Q14994 SNORD116-25-201ENST00000516517 92 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 RNU2-12P-201ENST00000517216 168 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.35□□□□□ -1.87
NR1I3Q14994 AL356575.1-201ENST00000603008 283 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC006380.1-201ENST00000603598 186 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC091152.3-201ENST00000604227 325 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AL034555.1-201ENST00000604816 211 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 AC005520.5-201ENST00000613926 164 ntBASIC3.35□□□□□ -1.87
NR1I3Q14994 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
NR1I3Q14994 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NR1I3Q14994 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.34□□□□□ -1.87
NR1I3Q14994 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR1I3Q14994 AC068700.1-201ENST00000565862 3754 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC073325.2-201ENST00000339545 159 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RNU6-1290P-201ENST00000362957 109 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 Y_RNA.400-201ENST00000383963 111 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RNU6-22P-201ENST00000384355 107 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RNU6-959P-201ENST00000384671 107 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RNU6-19P-201ENST00000384718 107 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 Y_RNA.568-201ENST00000384742 113 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 MIR181B1-201ENST00000385240 110 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 MIR320B2-201ENST00000408479 138 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RNU2-51P-201ENST00000410708 197 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC027124.2-201ENST00000428249 105 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 HMGN2P31-201ENST00000432430 273 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AL162725.1-201ENST00000435405 301 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.34□□□□□ -1.87
NR1I3Q14994 AL135790.2-201ENST00000437701 267 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 HMGN2P16-201ENST00000456802 261 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RPS27AP9-201ENST00000477681 438 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 RPL31P41-201ENST00000477967 372 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.34□□□□□ -1.87
NR1I3Q14994 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
NR1I3Q14994 AC009127.3-201ENST00000570531 403 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC006130.2-201ENST00000586202 326 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 MIR8058-201ENST00000615737 89 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
NR1I3Q14994 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NR1I3Q14994 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
NR1I3Q14994 GABRG2-229ENST00000641017 3628 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU6-801P-201ENST00000364087 105 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU4-84P-201ENST00000364200 139 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 Y_RNA.215-201ENST00000364204 112 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU4-10P-201ENST00000364383 140 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU6-312P-201ENST00000364629 107 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 Y_RNA.357-201ENST00000365487 109 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 SNORA40.19-201ENST00000390846 128 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU6-1248P-201ENST00000391096 64 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1I3Q14994 RPS20P10-201ENST00000451209 253 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 RNU1-117P-201ENST00000517041 158 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1I3Q14994 DEFB131C-201ENST00000528817 165 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1I3Q14994 RPS15AP11-201ENST00000594193 385 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 PCGEM1.1-201ENST00000613431 131 ntBASIC3.33□□□□□ -1.88
NR1I3Q14994 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms