Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RNU6-1213P-201ENST00000517075 94 ntBASIC1.65□□□□□ -2.15
CD47Q08722 CBX3P8-201ENST00000532412 525 ntBASIC1.65□□□□□ -2.15
CD47Q08722 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.65□□□□□ -2.15
CD47Q08722 AC005730.3-201ENST00000583067 366 ntBASIC1.65□□□□□ -2.15
CD47Q08722 SNRPGP17-201ENST00000603780 214 ntBASIC1.65□□□□□ -2.15
CD47Q08722 AL355073.2-201ENST00000612106 557 ntBASIC1.65□□□□□ -2.15
CD47Q08722 TPTEP1-208ENST00000636884 213 ntBASIC1.65□□□□□ -2.15
CD47Q08722 ZNF355P-201ENST00000427301 3216 ntBASIC1.65□□□□□ -2.15
CD47Q08722 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CD47Q08722 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CD47Q08722 SNORA72.1-201ENST00000363485 129 ntBASIC1.64□□□□□ -2.15
CD47Q08722 RNY3P14-201ENST00000384309 102 ntBASIC1.64□□□□□ -2.15
CD47Q08722 RNU6-601P-201ENST00000384540 107 ntBASIC1.64□□□□□ -2.15
CD47Q08722 MIR32-201ENST00000384965 70 ntBASIC1.64□□□□□ -2.15
CD47Q08722 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CD47Q08722 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
CD47Q08722 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
CD47Q08722 MTCO3P29-201ENST00000432119 779 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AC098614.3-201ENST00000438957 440 ntBASIC1.64□□□□□ -2.15
CD47Q08722 MTND3P10-201ENST00000450967 341 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AC107399.1-201ENST00000451226 265 ntBASIC1.64□□□□□ -2.15
CD47Q08722 OR2AQ1P-201ENST00000451972 200 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.64□□□□□ -2.15
CD47Q08722 RPS29P21-201ENST00000496272 170 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
CD47Q08722 Y_RNA.691-201ENST00000516611 103 ntBASIC1.64□□□□□ -2.15
CD47Q08722 RNA5SP384-201ENST00000516615 116 ntBASIC1.64□□□□□ -2.15
CD47Q08722 RNU6-1016P-201ENST00000516689 94 ntBASIC1.64□□□□□ -2.15
CD47Q08722 RNA5SP490-201ENST00000517141 136 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
CD47Q08722 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
CD47Q08722 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.64□□□□□ -2.15
CD47Q08722 RBM11P1-201ENST00000604951 799 ntBASIC1.64□□□□□ -2.15
CD47Q08722 AC009229.3-201ENST00000608056 282 ntBASIC1.64□□□□□ -2.15
CD47Q08722 SCARNA4-201ENST00000629045 128 ntBASIC1.64□□□□□ -2.15
CD47Q08722 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
CD47Q08722 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CD47Q08722 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.63□□□□□ -2.15
CD47Q08722 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CD47Q08722 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RNU6-596P-201ENST00000365395 98 ntBASIC1.63□□□□□ -2.15
CD47Q08722 Y_RNA.474-201ENST00000384341 102 ntBASIC1.63□□□□□ -2.15
CD47Q08722 SNORD14D-201ENST00000384390 87 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RNU6-331P-201ENST00000384724 107 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MIR518A2-201ENST00000384966 87 ntBASIC1.63□□□□□ -2.15
CD47Q08722 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CD47Q08722 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AL512604.1-201ENST00000404812 257 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MIR1283-2-201ENST00000408621 87 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RNU6-1050P-201ENST00000410388 107 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RPL37P10-201ENST00000412884 288 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RPS26P42-201ENST00000413485 326 ntBASIC1.63□□□□□ -2.15
CD47Q08722 SNRPEP8-201ENST00000442866 260 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AL035666.1-201ENST00000446195 348 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MTCO3P8-201ENST00000453691 755 ntBASIC1.63□□□□□ -2.15
CD47Q08722 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
CD47Q08722 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.63□□□□□ -2.15
CD47Q08722 RPL23AP94-201ENST00000512518 302 ntBASIC1.63□□□□□ -2.15
CD47Q08722 RNU6-507P-201ENST00000516045 100 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.63□□□□□ -2.15
CD47Q08722 AC005668.1-201ENST00000571142 476 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MIR4513-201ENST00000581077 86 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MIR4273-201ENST00000582824 84 ntBASIC1.63□□□□□ -2.15
CD47Q08722 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.63□□□□□ -2.15
CD47Q08722 AC005034.5-201ENST00000604219 466 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AC016727.1-205ENST00000605437 569 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AP000654.2-201ENST00000605633 586 ntBASIC1.63□□□□□ -2.15
CD47Q08722 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.63□□□□□ -2.15
CD47Q08722 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.63□□□□□ -2.15
CD47Q08722 AP006437.1-201ENST00000641440 3685 ntBASIC1.62□□□□□ -2.15
CD47Q08722 RNU6-545P-201ENST00000362681 104 ntBASIC1.62□□□□□ -2.15
CD47Q08722 RNU1-76P-201ENST00000362903 159 ntBASIC1.62□□□□□ -2.15
CD47Q08722 MIR597-201ENST00000384968 97 ntBASIC1.62□□□□□ -2.15
CD47Q08722 SRIP3-201ENST00000413200 219 ntBASIC1.62□□□□□ -2.15
CD47Q08722 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
CD47Q08722 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
CD47Q08722 RNU7-14P-201ENST00000459331 62 ntBASIC1.62□□□□□ -2.15
CD47Q08722 AC091951.2-201ENST00000500762 203 ntBASIC1.62□□□□□ -2.15
CD47Q08722 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
CD47Q08722 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.62□□□□□ -2.15
CD47Q08722 RNU6-120P-201ENST00000516077 103 ntBASIC1.62□□□□□ -2.15
CD47Q08722 RNU5F-4P-201ENST00000516581 114 ntBASIC1.62□□□□□ -2.15
CD47Q08722 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.62□□□□□ -2.15
CD47Q08722 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.62□□□□□ -2.15
CD47Q08722 AC026271.5-201ENST00000577873 130 ntBASIC1.62□□□□□ -2.15
CD47Q08722 MIR4287-201ENST00000579398 78 ntBASIC1.62□□□□□ -2.15
CD47Q08722 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.62□□□□□ -2.15
CD47Q08722 AC005014.2-201ENST00000607795 599 ntBASIC1.62□□□□□ -2.15
CD47Q08722 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
CD47Q08722 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.62□□□□□ -2.15
CD47Q08722 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.62□□□□□ -2.15
CD47Q08722 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
CD47Q08722 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CD47Q08722 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
CD47Q08722 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
CD47Q08722 ZNF204P-201ENST00000416749 2397 ntBASIC1.61□□□□□ -2.15
CD47Q08722 Y_RNA.2-201ENST00000362330 96 ntBASIC1.61□□□□□ -2.15
CD47Q08722 RNU6-595P-201ENST00000363944 107 ntBASIC1.61□□□□□ -2.15
CD47Q08722 Y_RNA.332-201ENST00000365271 113 ntBASIC1.61□□□□□ -2.15
CD47Q08722 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms