Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Y_RNA.151-201ENST00000363566 112 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNU6-1286P-201ENST00000383871 107 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNA5SP494-201ENST00000410653 129 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 HMGB1P18-201ENST00000438801 619 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNU7-66P-201ENST00000459469 62 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AF186996.7-201ENST00000492781 209 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RPS23P5-201ENST00000495419 428 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 RNU6-720P-201ENST00000516363 108 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 SNORA59B-202ENST00000578183 701 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGCS1Q01581 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AC016727.2-201ENST00000603988 621 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AC012557.2-201ENST00000605919 418 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGCS1Q01581 MIR8076-201ENST00000611401 83 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
HMGCS1Q01581 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.34□□□□□ -2.2
HMGCS1Q01581 RNA5SP432-201ENST00000362480 116 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 Y_RNA.140-201ENST00000363474 103 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 SNORD31B-201ENST00000364977 69 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 RNU6-968P-201ENST00000384076 107 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 Y_RNA.516-201ENST00000384541 124 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 MIR487A-201ENST00000385009 80 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 MIR181A1-201ENST00000385026 110 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.33□□□□□ -2.2
HMGCS1Q01581 MTND3P21-201ENST00000433774 331 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGCS1Q01581 MTCO3P18-201ENST00000440206 761 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 MTND1P11-201ENST00000456661 876 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC016925.1-201ENST00000458303 298 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 RNU1-131P-201ENST00000458943 161 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC114801.2-201ENST00000503825 781 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC091435.1-201ENST00000505442 584 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC016256.1-201ENST00000547971 354 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 TPRKBP2-201ENST00000565969 475 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 EIF1P4-201ENST00000572664 335 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 FGF7P1-201ENST00000582820 288 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 AC245060.5-201ENST00000610778 3293 ntBASIC1.33□□□□□ -2.2
HMGCS1Q01581 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 CBX3P1-201ENST00000325243 554 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 Y_RNA.402-201ENST00000383972 102 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 RNU6-95P-201ENST00000384697 107 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 SNORD116-4-201ENST00000384733 96 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 MTCO1P21-201ENST00000416634 589 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC010531.2-201ENST00000465012 153 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC097473.1-201ENST00000508142 408 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC109635.3-201ENST00000529536 185 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 MIR3672-201ENST00000584290 82 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AL133215.3-201ENST00000609801 448 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 AL138726.1-201ENST00000614873 333 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.32□□□□□ -2.2
HMGCS1Q01581 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGCS1Q01581 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMGCS1Q01581 SNORD50.1-201ENST00000362987 71 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNY4P14-201ENST00000363656 96 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNU6-128P-201ENST00000383976 107 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNU6-418P-201ENST00000384035 107 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNU6-784P-201ENST00000384330 106 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNU6-933P-201ENST00000384424 107 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNU6-1026P-201ENST00000384465 108 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC004866.1-201ENST00000411748 78 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 SNRPEP10-201ENST00000420249 274 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 Z82205.1-201ENST00000428456 297 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC004386.2-201ENST00000441858 148 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC010409.1-201ENST00000487382 476 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 RNA5SP458-201ENST00000516188 119 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC005786.1-201ENST00000588553 154 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC023043.2-201ENST00000589678 1026 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 RMST_6.1-201ENST00000611980 203 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
HMGCS1Q01581 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.31□□□□□ -2.2
HMGCS1Q01581 AC090617.10-201ENST00000624308 134 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms