Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU6-143P-201ENST00000516942 93 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 NAMPTP3-201ENST00000569273 224 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 MIR3136-201ENST00000583498 78 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RBM11P1-201ENST00000604951 799 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 BCRP9-201ENST00000605312 388 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 AC093875.1-201ENST00000623688 504 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RNU1-76P-201ENST00000362903 159 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RNU6-199P-201ENST00000362954 107 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RNY4P27-201ENST00000363341 96 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RNU4-56P-201ENST00000364700 142 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 SNORA2.2-201ENST00000365473 135 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 RNU6-395P-201ENST00000365662 106 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 MIR1827-201ENST00000408549 66 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.18□□□□□ -2.44
HSPG2P98160 MTCO2P7-201ENST00000446518 666 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.18□□□□□ -2.44
HSPG2P98160 AC023538.1-201ENST00000534576 736 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 MIR548AO-201ENST00000579992 96 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 AC005332.6-201ENST00000613178 446 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 AL031667.3-201ENST00000620124 655 ntBASIC-0.18□□□□□ -2.44
HSPG2P98160 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.18□□□□□ -2.44
HSPG2P98160 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-701P-201ENST00000384059 107 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
HSPG2P98160 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.19□□□□□ -2.44
HSPG2P98160 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
HSPG2P98160 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.19□□□□□ -2.44
HSPG2P98160 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU7-165P-201ENST00000458864 60 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AL391840.1-201ENST00000571144 367 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AC090615.1-201ENST00000577519 154 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.19□□□□□ -2.44
HSPG2P98160 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-114P-201ENST00000384704 105 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 MIR573-201ENST00000384964 99 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-284P-201ENST00000411105 106 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 MTCO3P17-201ENST00000443775 513 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNA5SP135-201ENST00000517019 125 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 MIR4742-201ENST00000581069 85 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 MIR6755-201ENST00000619993 66 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AC024940.5-201ENST00000622889 474 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AL603839.4-201ENST00000624658 1005 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 SNORD32A-201ENST00000364805 84 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNA5SP467-201ENST00000391274 118 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.19□□□□□ -2.44
HSPG2P98160 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.19□□□□□ -2.44
HSPG2P98160 SCARNA17-201ENST00000516183 144 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU2-34P-201ENST00000516534 121 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU6-572P-201ENST00000516724 80 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AC009902.1-201ENST00000519351 183 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AF235103.2-201ENST00000525753 346 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 AL606834.3-201ENST00000602615 496 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 FTX_2.1-201ENST00000618816 94 ntBASIC-0.19□□□□□ -2.44
HSPG2P98160 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.19□□□□□ -2.44
HSPG2P98160 RNU4-84P-201ENST00000364200 139 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-975P-201ENST00000384296 105 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 SNORA8.2-201ENST00000384372 139 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-747P-201ENST00000390928 104 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-241P-201ENST00000391148 104 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 MTND1P17-201ENST00000448961 204 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AL133217.1-201ENST00000450980 425 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 SCARNA18-201ENST00000459004 134 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC010531.2-201ENST00000465012 153 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 MTND3P5-201ENST00000512798 333 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 MRPS36P4-201ENST00000534436 298 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 BNIP3P9-201ENST00000603714 553 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC080078.2-201ENST00000603766 501 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC106754.2-201ENST00000623006 233 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 MTND5P17-201ENST00000418405 1603 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AP000568.1-201ENST00000282964 442 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU6-932P-201ENST00000391108 106 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC016909.1-201ENST00000415916 166 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 RNU7-59P-201ENST00000459101 61 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 RPS23P5-201ENST00000495419 428 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-0.2□□□□□ -2.44
HSPG2P98160 AC090049.2-201ENST00000550377 109 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC109446.1-201ENST00000566172 220 ntBASIC-0.2□□□□□ -2.44
HSPG2P98160 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms