Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-370P-201ENST00000411008 104 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.31□□□□□ -2.46
PRKDCP78527 OR8K2P-201ENST00000524645 927 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AF235103.2-201ENST00000525753 346 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC092447.9-201ENST00000603395 144 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AL513423.1-201ENST00000621695 132 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU4-84P-201ENST00000364200 139 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU2-28P-201ENST00000410457 189 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.31□□□□□ -2.46
PRKDCP78527 MRPL42P4-201ENST00000453267 443 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU6-287P-201ENST00000516230 98 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.31□□□□□ -2.46
PRKDCP78527 MIR6755-201ENST00000619993 66 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AC104820.1-201ENST00000624183 307 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 AL356094.1-201ENST00000624663 1212 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 MTND5P16-201ENST00000460269 1703 ntBASIC-0.31□□□□□ -2.46
PRKDCP78527 SNORA72.1-201ENST00000363485 129 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SNORD114-6-201ENST00000364393 72 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-891P-201ENST00000384280 111 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-1176P-201ENST00000390955 107 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.32□□□□□ -2.46
PRKDCP78527 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
PRKDCP78527 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.32□□□□□ -2.46
PRKDCP78527 MTCO2P15-201ENST00000532655 656 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.32□□□□□ -2.46
PRKDCP78527 ZNF971P-201ENST00000562068 1249 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AL355816.2-201ENST00000610049 647 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SCARNA4-202ENST00000625402 129 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SEC63P2-201ENST00000503863 1939 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-188P-201ENST00000364207 107 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SNORD32A-201ENST00000364805 84 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-932P-201ENST00000391108 106 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.32□□□□□ -2.46
PRKDCP78527 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.32□□□□□ -2.46
PRKDCP78527 AC109327.2-201ENST00000448339 378 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SNORD54-201ENST00000459159 67 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AC027419.1-201ENST00000522976 328 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AC023442.1-201ENST00000531247 422 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 BCRP9-201ENST00000605312 388 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 SMIM11P1-201ENST00000369586 178 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.32□□□□□ -2.46
PRKDCP78527 MED28P2-201ENST00000475771 317 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.32□□□□□ -2.46
PRKDCP78527 RPF2P2-201ENST00000504693 896 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 MTCO3P28-201ENST00000513351 515 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 MIR3136-201ENST00000583498 78 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AC107982.1-201ENST00000507171 1300 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 MIR412-201ENST00000362142 91 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 MIR891A-201ENST00000401237 79 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AL139396.1-201ENST00000421137 167 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 ELOCP30-201ENST00000447108 299 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 AC026410.2-201ENST00000460281 156 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.32□□□□□ -2.46
PRKDCP78527 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.32□□□□□ -2.46
PRKDCP78527 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.32□□□□□ -2.46
PRKDCP78527 MIR5006-201ENST00000583027 110 ntBASIC-0.32□□□□□ -2.46
PRKDCP78527 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.32□□□□□ -2.46
PRKDCP78527 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.33□□□□□ -2.46
PRKDCP78527 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.33□□□□□ -2.46
PRKDCP78527 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.33□□□□□ -2.46
PRKDCP78527 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.33□□□□□ -2.46
PRKDCP78527 MTCYBP10-201ENST00000424905 650 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 MTCO1P20-201ENST00000425366 358 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.33□□□□□ -2.46
PRKDCP78527 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.33□□□□□ -2.46
PRKDCP78527 RPL23AP91-201ENST00000569211 455 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RNU6-78P-201ENST00000362897 107 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RNU4-76P-201ENST00000364509 141 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RPL39P6-201ENST00000448289 150 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.33□□□□□ -2.46
PRKDCP78527 AC091021.1-201ENST00000468051 388 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 MIR3923-201ENST00000579521 83 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 MIR5695-201ENST00000579717 85 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 MTND5P17-201ENST00000418405 1603 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 USP9YP21-201ENST00000420603 432 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RNU7-165P-201ENST00000458864 60 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 MTND3P5-201ENST00000512798 333 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.33□□□□□ -2.46
PRKDCP78527 RNU6-158P-201ENST00000517104 100 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RN7SL660P-201ENST00000614852 299 ntBASIC-0.33□□□□□ -2.46
PRKDCP78527 RNU6-562P-201ENST00000362731 107 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 SNORD83.1-201ENST00000411362 77 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.34□□□□□ -2.46
PRKDCP78527 MTCO2P7-201ENST00000446518 666 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 AC011979.2-201ENST00000527568 352 ntBASIC-0.34□□□□□ -2.46
PRKDCP78527 MIR3612-201ENST00000579753 87 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms