Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 RNU6-1286P-201ENST00000383871 107 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 RNU6-975P-201ENST00000384296 105 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC004866.1-201ENST00000411748 78 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC004965.1-201ENST00000413033 213 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
EIF3EP60228 MTND3P9-201ENST00000429526 346 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 USP9YP14-201ENST00000430663 563 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC004386.2-201ENST00000441858 148 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 TPTE2P5-203ENST00000458118 728 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 MTCO3P38-201ENST00000468910 766 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC010493.1-201ENST00000513479 292 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 RNU6-189P-201ENST00000516120 101 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 SNORA40.12-201ENST00000516329 111 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 RNU6-948P-201ENST00000516374 107 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC087854.1-201ENST00000519706 414 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 CENPUP1-201ENST00000526649 1202 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AL512310.8-201ENST00000550183 120 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 SCOCP1-201ENST00000554676 349 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
EIF3EP60228 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
EIF3EP60228 AC104458.1-201ENST00000608243 463 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC073114.1-201ENST00000612027 490 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AC139792.3-201ENST00000623525 224 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 AL359697.1-201ENST00000624879 587 ntBASIC1.1□□□□□ -2.23
EIF3EP60228 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
EIF3EP60228 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
EIF3EP60228 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
EIF3EP60228 snoU2-30.2-201ENST00000362805 70 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 SNORA33-201ENST00000363664 130 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 RNU6-1329P-201ENST00000365664 107 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 RNU6-331P-201ENST00000384724 107 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
EIF3EP60228 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.09□□□□□ -2.23
EIF3EP60228 AC009237.7-201ENST00000447357 229 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AC016717.1-201ENST00000448918 286 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.09□□□□□ -2.23
EIF3EP60228 AC007215.1-201ENST00000464893 276 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.09□□□□□ -2.23
EIF3EP60228 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.09□□□□□ -2.23
EIF3EP60228 HMGB1P29-201ENST00000505659 499 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 Y_RNA.695-201ENST00000516715 107 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.09□□□□□ -2.23
EIF3EP60228 AL118558.2-201ENST00000556294 238 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 MIR4524B-201ENST00000581569 115 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AC009509.4-201ENST00000619202 509 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
EIF3EP60228 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
EIF3EP60228 RNU6-1317P-201ENST00000364582 104 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 Y_RNA.381-201ENST00000365666 102 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 RNA5SP494-201ENST00000410653 129 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 COX6CP10-201ENST00000416832 224 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.08□□□□□ -2.24
EIF3EP60228 AL606489.2-201ENST00000433886 234 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 NFU1P2-201ENST00000448700 469 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 U8.21-201ENST00000459536 136 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.08□□□□□ -2.24
EIF3EP60228 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
EIF3EP60228 AL442163.3-201ENST00000554110 156 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 FGF7P1-201ENST00000582820 288 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 AP000942.3-201ENST00000603702 160 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
EIF3EP60228 AL158063.1-201ENST00000615349 536 ntBASIC1.08□□□□□ -2.24
EIF3EP60228 AL391987.6-201ENST00000305671 199 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 RNU6-968P-201ENST00000384076 107 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
EIF3EP60228 RNU6-482P-201ENST00000391068 107 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AL663109.1-201ENST00000411498 844 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.07□□□□□ -2.24
EIF3EP60228 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
EIF3EP60228 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
EIF3EP60228 MTCO3P8-201ENST00000453691 755 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AC114982.1-201ENST00000469402 321 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 RPS26P45-201ENST00000471748 340 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AF186996.7-201ENST00000492781 209 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 RN7SKP88-201ENST00000516847 250 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AC104576.1-201ENST00000524225 88 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 MRPS36P4-201ENST00000534436 298 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AC025423.5-201ENST00000550230 219 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 MIR5692C1-201ENST00000585309 91 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 7SK.8-201ENST00000612110 250 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 7SK.11-201ENST00000615477 250 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 7SK.13-201ENST00000622040 250 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 AC009033.1-201ENST00000624279 431 ntBASIC1.07□□□□□ -2.24
EIF3EP60228 Y_RNA.1-201ENST00000352915 104 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 Y_RNA.287-201ENST00000364853 94 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 RNU6-38P-201ENST00000384085 107 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 SNORA67.2-201ENST00000384300 149 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 MIR515-2-201ENST00000384883 83 ntBASIC1.06□□□□□ -2.24
EIF3EP60228 MIR515-1-201ENST00000384884 83 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms