Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU1-68P-201ENST00000615382 146 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 U1.39-201ENST00000621562 146 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLRN1P58418 MIR7515-201ENST00000637837 67 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.83□□□□□ -1.96
CLRN1P58418 AP003122.5-201ENST00000527668 3766 ntBASIC2.83□□□□□ -1.96
CLRN1P58418 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLRN1P58418 AC110774.1-201ENST00000623567 2018 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 RNU1-72P-201ENST00000362976 153 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 Y_RNA.200-201ENST00000364018 102 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 Y_RNA.297-201ENST00000364950 91 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLRN1P58418 RNU6-651P-201ENST00000411040 105 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.82□□□□□ -1.96
CLRN1P58418 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.82□□□□□ -1.96
CLRN1P58418 YME1L1P1-201ENST00000429435 297 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AC006028.1-201ENST00000438379 402 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AC091153.1-201ENST00000466297 402 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.82□□□□□ -1.96
CLRN1P58418 MIR2682-201ENST00000580305 110 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AL162424.1-201ENST00000602325 221 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 AC084757.4-201ENST00000616350 526 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
CLRN1P58418 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLRN1P58418 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CLRN1P58418 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLRN1P58418 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
CLRN1P58418 Y_RNA.117-201ENST00000363294 101 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 RNU6-454P-201ENST00000364292 107 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 RNA5SP72-201ENST00000364442 117 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 Y_RNA.275-201ENST00000364726 110 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 Y_RNA.785-201ENST00000384290 109 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 SNORA67.2-201ENST00000384300 149 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AL357075.1-201ENST00000404107 726 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLRN1P58418 MIR1298-201ENST00000408783 112 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 RNU2-54P-201ENST00000410299 190 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AC009963.1-201ENST00000417265 157 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 RPL30P4-201ENST00000429309 333 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.81□□□□□ -1.96
CLRN1P58418 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 RPS29P26-201ENST00000477483 171 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.81□□□□□ -1.96
CLRN1P58418 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.81□□□□□ -1.96
CLRN1P58418 MIR449C-201ENST00000516047 92 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 SNORA27.4-201ENST00000516650 95 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.81□□□□□ -1.96
CLRN1P58418 MIR3145-201ENST00000580727 82 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AL133393.1-201ENST00000603277 287 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.81□□□□□ -1.96
CLRN1P58418 MIR7975-201ENST00000619350 68 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.81□□□□□ -1.96
CLRN1P58418 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CLRN1P58418 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLRN1P58418 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLRN1P58418 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.81□□□□□ -1.96
CLRN1P58418 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLRN1P58418 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.8□□□□□ -1.96
CLRN1P58418 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.8□□□□□ -1.96
CLRN1P58418 UBE2WP1-201ENST00000362030 340 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 RNU6-1274P-201ENST00000384557 107 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 MIR548I3-201ENST00000408378 149 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 MIR548I1-201ENST00000408810 149 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 AC109925.1-201ENST00000478069 331 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.8□□□□□ -1.96
CLRN1P58418 RNU5F-4P-201ENST00000516581 114 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 RNU6-1098P-201ENST00000516772 96 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 Y_RNA.700-201ENST00000516806 100 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 SNORA81.3-201ENST00000517283 198 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 AL512605.2-201ENST00000592972 256 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 AL713866.2-201ENST00000603579 219 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 RPL17P51-201ENST00000605218 238 ntBASIC2.8□□□□□ -1.96
CLRN1P58418 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLRN1P58418 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLRN1P58418 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLRN1P58418 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.79□□□□□ -1.96
CLRN1P58418 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLRN1P58418 RNU4-80P-201ENST00000363200 141 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 Y_RNA.122-201ENST00000363331 96 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RNU6-944P-201ENST00000364023 107 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RNU6-209P-201ENST00000384118 107 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RNU6-1289P-201ENST00000384431 106 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.79□□□□□ -1.96
CLRN1P58418 MICF-203ENST00000432679 129 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RPS12P18-201ENST00000442381 270 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RN7SL601P-201ENST00000471221 293 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 AC006483.1-201ENST00000487308 313 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 SNORD116-28-201ENST00000516123 91 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RNU6-182P-201ENST00000516970 105 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 RNU2-12P-201ENST00000517216 168 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.79□□□□□ -1.96
CLRN1P58418 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
CLRN1P58418 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.79□□□□□ -1.96
CLRN1P58418 MIR3199-1-201ENST00000582434 88 ntBASIC2.79□□□□□ -1.96
CLRN1P58418 AC010620.2-201ENST00000600135 313 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 646.4 ms