Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.19□□□□□ -2.22
VSX2P58304 AC025465.3-201ENST00000510570 311 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RNA5SP401-201ENST00000515920 127 ntBASIC1.19□□□□□ -2.22
VSX2P58304 RNU6-567P-201ENST00000516746 107 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.19□□□□□ -2.22
VSX2P58304 AC104383.1-201ENST00000530297 370 ntBASIC1.19□□□□□ -2.22
VSX2P58304 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
VSX2P58304 HMGB1P33-201ENST00000563485 527 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AP005136.1-201ENST00000579765 429 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AC017083.3-201ENST00000609955 700 ntBASIC1.19□□□□□ -2.22
VSX2P58304 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
VSX2P58304 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.19□□□□□ -2.22
VSX2P58304 AC139792.3-201ENST00000623525 224 ntBASIC1.19□□□□□ -2.22
VSX2P58304 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.19□□□□□ -2.22
VSX2P58304 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VSX2P58304 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VSX2P58304 AC010615.1-201ENST00000594254 1764 ntBASIC1.19□□□□□ -2.22
VSX2P58304 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
VSX2P58304 MIR302D-201ENST00000362275 68 ntBASIC1.18□□□□□ -2.22
VSX2P58304 Y_RNA.132-201ENST00000363421 102 ntBASIC1.18□□□□□ -2.22
VSX2P58304 SNORA69-201ENST00000383895 132 ntBASIC1.18□□□□□ -2.22
VSX2P58304 RNU6-1026P-201ENST00000384465 108 ntBASIC1.18□□□□□ -2.22
VSX2P58304 RNY3P9-201ENST00000384727 106 ntBASIC1.18□□□□□ -2.22
VSX2P58304 Y_RNA.582-201ENST00000391023 95 ntBASIC1.18□□□□□ -2.22
VSX2P58304 MIR1276-201ENST00000408707 83 ntBASIC1.18□□□□□ -2.22
VSX2P58304 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.18□□□□□ -2.22
VSX2P58304 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.18□□□□□ -2.22
VSX2P58304 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.18□□□□□ -2.22
VSX2P58304 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.18□□□□□ -2.22
VSX2P58304 AC073413.2-201ENST00000604332 360 ntBASIC1.18□□□□□ -2.22
VSX2P58304 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
VSX2P58304 RN7SKP299-201ENST00000606679 301 ntBASIC1.18□□□□□ -2.22
VSX2P58304 AL357078.3-201ENST00000607528 618 ntBASIC1.18□□□□□ -2.22
VSX2P58304 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
VSX2P58304 RNU6-562P-201ENST00000362731 107 ntBASIC1.17□□□□□ -2.22
VSX2P58304 Y_RNA.123-201ENST00000363338 102 ntBASIC1.17□□□□□ -2.22
VSX2P58304 SNORA33-201ENST00000363664 130 ntBASIC1.17□□□□□ -2.22
VSX2P58304 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
VSX2P58304 MIR520A-201ENST00000384862 85 ntBASIC1.17□□□□□ -2.22
VSX2P58304 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
VSX2P58304 ARL5AP1-201ENST00000418991 388 ntBASIC1.17□□□□□ -2.22
VSX2P58304 AC015922.2-201ENST00000435593 184 ntBASIC1.17□□□□□ -2.22
VSX2P58304 JTBP1-201ENST00000441314 247 ntBASIC1.17□□□□□ -2.22
VSX2P58304 AC004386.2-201ENST00000441858 148 ntBASIC1.17□□□□□ -2.22
VSX2P58304 MTND3P16-201ENST00000452205 344 ntBASIC1.17□□□□□ -2.22
VSX2P58304 MTCO3P8-201ENST00000453691 755 ntBASIC1.17□□□□□ -2.22
VSX2P58304 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
VSX2P58304 HMGN1P13-201ENST00000505795 138 ntBASIC1.17□□□□□ -2.22
VSX2P58304 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.17□□□□□ -2.22
VSX2P58304 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.17□□□□□ -2.22
VSX2P58304 AL157687.1-201ENST00000554853 619 ntBASIC1.17□□□□□ -2.22
VSX2P58304 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.17□□□□□ -2.22
VSX2P58304 AP001330.5-201ENST00000607176 411 ntBASIC1.17□□□□□ -2.22
VSX2P58304 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
VSX2P58304 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VSX2P58304 Y_RNA.67-201ENST00000362870 100 ntBASIC1.16□□□□□ -2.22
VSX2P58304 Y_RNA.77-201ENST00000362962 107 ntBASIC1.16□□□□□ -2.22
VSX2P58304 RNU6-414P-201ENST00000363705 104 ntBASIC1.16□□□□□ -2.22
VSX2P58304 SNORA4.2-201ENST00000365313 147 ntBASIC1.16□□□□□ -2.22
VSX2P58304 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
VSX2P58304 RNU6-360P-201ENST00000390944 104 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AF228730.1-201ENST00000397972 663 ntBASIC1.16□□□□□ -2.22
VSX2P58304 MIR450B-201ENST00000401182 78 ntBASIC1.16□□□□□ -2.22
VSX2P58304 MIR1267-201ENST00000408723 78 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.16□□□□□ -2.22
VSX2P58304 TIMM9P3-201ENST00000428659 274 ntBASIC1.16□□□□□ -2.22
VSX2P58304 OR2AQ1P-201ENST00000451972 200 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AF186996.7-201ENST00000492781 209 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC010486.3-201ENST00000511602 785 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC067942.3-201ENST00000512025 362 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC011406.1-201ENST00000512440 370 ntBASIC1.16□□□□□ -2.22
VSX2P58304 SNORD60.2-201ENST00000516883 86 ntBASIC1.16□□□□□ -2.22
VSX2P58304 RNU6-856P-201ENST00000516959 98 ntBASIC1.16□□□□□ -2.22
VSX2P58304 RNU6-835P-201ENST00000516974 104 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC087854.1-201ENST00000519706 414 ntBASIC1.16□□□□□ -2.22
VSX2P58304 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.16□□□□□ -2.22
VSX2P58304 RRN3P3-201ENST00000549207 578 ntBASIC1.16□□□□□ -2.22
VSX2P58304 SCOCP1-201ENST00000554676 349 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC010620.1-201ENST00000601088 1102 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AP003465.2-201ENST00000602571 373 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AC092807.2-201ENST00000609367 243 ntBASIC1.16□□□□□ -2.22
VSX2P58304 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
VSX2P58304 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.16□□□□□ -2.22
VSX2P58304 AL136221.1-201ENST00000621449 509 ntBASIC1.16□□□□□ -2.22
VSX2P58304 MIR8063-201ENST00000621930 81 ntBASIC1.16□□□□□ -2.22
VSX2P58304 OR5AK4P-201ENST00000635912 903 ntBASIC1.16□□□□□ -2.22
VSX2P58304 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VSX2P58304 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
VSX2P58304 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.22
VSX2P58304 RNU6-82P-201ENST00000363970 107 ntBASIC1.15□□□□□ -2.23
VSX2P58304 SNORA63D-201ENST00000364359 132 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RNU6-331P-201ENST00000384724 107 ntBASIC1.15□□□□□ -2.23
VSX2P58304 SNORD37.1-201ENST00000390968 65 ntBASIC1.15□□□□□ -2.23
VSX2P58304 MIR1283-1-201ENST00000408494 87 ntBASIC1.15□□□□□ -2.23
VSX2P58304 RNA5SP494-201ENST00000410653 129 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.15□□□□□ -2.23
VSX2P58304 USP9YP14-201ENST00000430663 563 ntBASIC1.15□□□□□ -2.23
VSX2P58304 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 1064.4 ms