Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC109810.1-201ENST00000534066 224 ntBASIC0.24□□□□□ -2.37
NUP98P52948 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.24□□□□□ -2.37
NUP98P52948 AC008521.1-201ENST00000587471 187 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.24□□□□□ -2.37
NUP98P52948 AC104458.1-201ENST00000608243 463 ntBASIC0.24□□□□□ -2.37
NUP98P52948 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.24□□□□□ -2.37
NUP98P52948 AC097372.5-201ENST00000623665 376 ntBASIC0.24□□□□□ -2.37
NUP98P52948 RNU6-428P-201ENST00000362942 107 ntBASIC0.24□□□□□ -2.37
NUP98P52948 SNORD116-13-201ENST00000384408 92 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AL606517.2-201ENST00000442855 241 ntBASIC0.24□□□□□ -2.37
NUP98P52948 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
NUP98P52948 AC104136.1-201ENST00000512969 394 ntBASIC0.24□□□□□ -2.37
NUP98P52948 BCRP9-201ENST00000605312 388 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AC064807.4-201ENST00000607201 407 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AP001596.2-201ENST00000608410 312 ntBASIC0.24□□□□□ -2.37
NUP98P52948 SNORD56.2-201ENST00000363242 71 ntBASIC0.23□□□□□ -2.37
NUP98P52948 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
NUP98P52948 RNU6-1031P-201ENST00000384773 107 ntBASIC0.23□□□□□ -2.37
NUP98P52948 MIR558-201ENST00000384920 94 ntBASIC0.23□□□□□ -2.37
NUP98P52948 CALM2P2-201ENST00000428512 440 ntBASIC0.23□□□□□ -2.37
NUP98P52948 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.23□□□□□ -2.37
NUP98P52948 AL606489.2-201ENST00000433886 234 ntBASIC0.23□□□□□ -2.37
NUP98P52948 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.23□□□□□ -2.37
NUP98P52948 AC022364.2-201ENST00000457963 554 ntBASIC0.23□□□□□ -2.37
NUP98P52948 LINC01399-202ENST00000458450 244 ntBASIC0.23□□□□□ -2.37
NUP98P52948 MIR5695-201ENST00000579717 85 ntBASIC0.23□□□□□ -2.37
NUP98P52948 MIR4802-201ENST00000581881 80 ntBASIC0.23□□□□□ -2.37
NUP98P52948 AC146944.4-201ENST00000602697 718 ntBASIC0.23□□□□□ -2.37
NUP98P52948 SNRPGP20-201ENST00000604477 205 ntBASIC0.23□□□□□ -2.37
NUP98P52948 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
NUP98P52948 TCL6_2.1-201ENST00000615162 119 ntBASIC0.23□□□□□ -2.37
NUP98P52948 SNORD32A-201ENST00000364805 84 ntBASIC0.22□□□□□ -2.37
NUP98P52948 Y_RNA.480-201ENST00000384364 102 ntBASIC0.22□□□□□ -2.37
NUP98P52948 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
NUP98P52948 RNA5SP323-201ENST00000391094 133 ntBASIC0.22□□□□□ -2.37
NUP98P52948 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
NUP98P52948 RPS29P13-201ENST00000402041 169 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AL451046.2-201ENST00000403074 277 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AL355796.1-201ENST00000406706 323 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MIR1253-201ENST00000408273 105 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MIR1265-201ENST00000408444 86 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MTND1P32-201ENST00000433043 938 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.22□□□□□ -2.37
NUP98P52948 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
NUP98P52948 RNU6-922P-201ENST00000516753 99 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MIR4667-201ENST00000578933 66 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MIR4753-201ENST00000585119 83 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AC097478.2-201ENST00000610572 514 ntBASIC0.22□□□□□ -2.37
NUP98P52948 RNU6-387P-201ENST00000411331 105 ntBASIC0.22□□□□□ -2.37
NUP98P52948 Z99497.1-201ENST00000421282 135 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MTND1P12-201ENST00000455231 147 ntBASIC0.22□□□□□ -2.37
NUP98P52948 RNU7-21P-201ENST00000459430 62 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AC008628.2-201ENST00000502605 298 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AC109479.2-201ENST00000517842 174 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AC023050.3-201ENST00000541142 333 ntBASIC0.22□□□□□ -2.37
NUP98P52948 Z98751.3-201ENST00000604447 521 ntBASIC0.22□□□□□ -2.37
NUP98P52948 AL136221.1-201ENST00000621449 509 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
NUP98P52948 MTND4P5-201ENST00000435821 1374 ntBASIC0.21□□□□□ -2.38
NUP98P52948 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
NUP98P52948 RNU6-440P-201ENST00000390882 105 ntBASIC0.21□□□□□ -2.38
NUP98P52948 SNORA26.3-201ENST00000391119 136 ntBASIC0.21□□□□□ -2.38
NUP98P52948 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.21□□□□□ -2.38
NUP98P52948 RNU6-123P-201ENST00000516163 102 ntBASIC0.21□□□□□ -2.38
NUP98P52948 AC106038.2-201ENST00000520706 568 ntBASIC0.21□□□□□ -2.38
NUP98P52948 MIR4307-201ENST00000582802 84 ntBASIC0.21□□□□□ -2.38
NUP98P52948 Z99289.3-201ENST00000605586 594 ntBASIC0.21□□□□□ -2.38
NUP98P52948 AC006386.1-201ENST00000619436 415 ntBASIC0.21□□□□□ -2.38
NUP98P52948 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.21□□□□□ -2.38
NUP98P52948 AL513423.1-201ENST00000621695 132 ntBASIC0.21□□□□□ -2.38
NUP98P52948 RNU6-199P-201ENST00000362954 107 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RNU6-190P-201ENST00000384154 102 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RNU6-975P-201ENST00000384296 105 ntBASIC0.2□□□□□ -2.38
NUP98P52948 SNORD115.1-201ENST00000391109 76 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RPL37P21-201ENST00000435890 276 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
NUP98P52948 STAG3L5P-204ENST00000443759 179 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.2□□□□□ -2.38
NUP98P52948 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.2□□□□□ -2.38
NUP98P52948 RNU6-1069P-201ENST00000516612 133 ntBASIC0.2□□□□□ -2.38
NUP98P52948 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
NUP98P52948 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.2□□□□□ -2.38
NUP98P52948 AC004584.2-201ENST00000570407 410 ntBASIC0.2□□□□□ -2.38
NUP98P52948 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AL158042.1-201ENST00000605338 460 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RNY4P16-201ENST00000364768 94 ntBASIC0.2□□□□□ -2.38
NUP98P52948 Y_RNA.287-201ENST00000364853 94 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
NUP98P52948 CDK8P2-201ENST00000415020 547 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AC090960.1-201ENST00000421072 306 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AL354692.1-201ENST00000423044 315 ntBASIC0.2□□□□□ -2.38
NUP98P52948 HSFY7P-201ENST00000432672 318 ntBASIC0.2□□□□□ -2.38
NUP98P52948 SNAP23P1-201ENST00000433229 246 ntBASIC0.2□□□□□ -2.38
NUP98P52948 HSFY8P-201ENST00000437934 318 ntBASIC0.2□□□□□ -2.38
NUP98P52948 RPL22P17-201ENST00000438729 315 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AL163973.1-201ENST00000484753 577 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.2□□□□□ -2.38
NUP98P52948 AC010486.2-201ENST00000505572 483 ntBASIC0.2□□□□□ -2.38
NUP98P52948 HMGB1P29-201ENST00000505659 499 ntBASIC0.2□□□□□ -2.38
NUP98P52948 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 271 ms