Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC013470.1-201ENST00000453438 462 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 OR9P1P-201ENST00000496431 281 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC091874.1-201ENST00000511402 339 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU1-142P-201ENST00000516682 145 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 RNU6-201P-201ENST00000517100 61 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AP003327.1-201ENST00000529684 127 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC016957.1-201ENST00000534895 309 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.04□□□□□ -2.42
GTF2A1P52655 AC008521.1-201ENST00000587471 187 ntBASIC-0.04□□□□□ -2.42
GTF2A1P52655 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.04□□□□□ -2.42
GTF2A1P52655 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 SNORA24.1-201ENST00000384401 135 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 RNU1-139P-201ENST00000391307 165 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 CALM2P3-201ENST00000400429 449 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 CDK8P2-201ENST00000415020 547 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 MTND3P17-201ENST00000416968 344 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 RPL31P35-201ENST00000431058 377 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.05□□□□□ -2.42
GTF2A1P52655 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 MTCO2P7-201ENST00000446518 666 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 LINC01399-202ENST00000458450 244 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
GTF2A1P52655 AC016256.1-201ENST00000547971 354 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.05□□□□□ -2.42
GTF2A1P52655 MIR3118-1-201ENST00000581787 76 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 MIR4307-201ENST00000582802 84 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 AL162424.1-201ENST00000602325 221 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 AL359075.3-201ENST00000613288 217 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.05□□□□□ -2.42
GTF2A1P52655 AC004808.1-201ENST00000627671 721 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 SNORA43.4-201ENST00000629559 138 ntBASIC-0.05□□□□□ -2.42
GTF2A1P52655 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.05□□□□□ -2.42
GTF2A1P52655 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
GTF2A1P52655 AL589826.1-201ENST00000340697 249 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNA5SP264-201ENST00000363115 107 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU4-67P-201ENST00000364569 141 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU6-413P-201ENST00000384115 107 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RPS29P13-201ENST00000402041 169 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 MIR1253-201ENST00000408273 105 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC090960.1-201ENST00000421072 306 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC007327.1-201ENST00000447461 264 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 SNRPGP12-201ENST00000449481 213 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC079382.1-201ENST00000493346 557 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 CYCTP-201ENST00000504253 315 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC010486.2-201ENST00000505572 483 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU7-128P-201ENST00000517247 62 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC004584.2-201ENST00000570407 410 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.06□□□□□ -2.42
GTF2A1P52655 MIR4514-201ENST00000581410 57 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 MIR3192-201ENST00000584920 77 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 RNU6-94P-201ENST00000607728 107 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AL136317.1-201ENST00000612653 226 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 MIR6718-201ENST00000616153 80 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 SEPT14P17-201ENST00000617978 177 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 AL136221.1-201ENST00000621449 509 ntBASIC-0.06□□□□□ -2.42
GTF2A1P52655 SNORD56.2-201ENST00000363242 71 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 RNA5SP62-201ENST00000363457 110 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 RNU6-793P-201ENST00000384233 104 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 STAG3L5P-204ENST00000443759 179 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC008628.2-201ENST00000502605 298 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC116353.3-201ENST00000511215 249 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 LRRC34P2-201ENST00000514850 553 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 SNORD111.1-201ENST00000516421 86 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 RNU4-77P-201ENST00000516692 156 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC023050.3-201ENST00000541142 333 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.07□□□□□ -2.42
GTF2A1P52655 MIR4768-201ENST00000585270 74 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC234772.3-201ENST00000602277 528 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AL121895.2-201ENST00000619558 447 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 AC099786.3-201ENST00000565735 1410 ntBASIC-0.07□□□□□ -2.42
GTF2A1P52655 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.07□□□□□ -2.42
GTF2A1P52655 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 RNU6-39P-201ENST00000384344 107 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 SNORD105-201ENST00000386910 85 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AC012306.1-201ENST00000423267 114 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.08□□□□□ -2.42
GTF2A1P52655 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.08□□□□□ -2.42
GTF2A1P52655 MTCO2P18-201ENST00000457151 658 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 TPT1P7-201ENST00000458300 517 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AC117522.1-201ENST00000509821 380 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 RNA5SP337-201ENST00000517007 109 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AC109479.2-201ENST00000517842 174 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AP003716.2-201ENST00000528260 108 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.08□□□□□ -2.42
GTF2A1P52655 MIR3124-201ENST00000582636 67 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AC023932.2-201ENST00000603176 175 ntBASIC-0.08□□□□□ -2.42
GTF2A1P52655 AL158042.1-201ENST00000605338 460 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms