Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
CASP4P49662 JTBP1-201ENST00000441314 247 ntBASIC1.38□□□□□ -2.19
CASP4P49662 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
CASP4P49662 MTND3P16-201ENST00000452205 344 ntBASIC1.38□□□□□ -2.19
CASP4P49662 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.38□□□□□ -2.19
CASP4P49662 AC114982.1-201ENST00000469402 321 ntBASIC1.38□□□□□ -2.19
CASP4P49662 AC067942.3-201ENST00000512025 362 ntBASIC1.38□□□□□ -2.19
CASP4P49662 RNA5SP458-201ENST00000516188 119 ntBASIC1.38□□□□□ -2.19
CASP4P49662 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.38□□□□□ -2.19
CASP4P49662 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.38□□□□□ -2.19
CASP4P49662 PRR13P7-201ENST00000605538 430 ntBASIC1.38□□□□□ -2.19
CASP4P49662 AL359880.1-201ENST00000621879 266 ntBASIC1.38□□□□□ -2.19
CASP4P49662 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.38□□□□□ -2.19
CASP4P49662 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CASP4P49662 RNU6-862P-201ENST00000362804 105 ntBASIC1.37□□□□□ -2.19
CASP4P49662 Y_RNA.167-201ENST00000363735 109 ntBASIC1.37□□□□□ -2.19
CASP4P49662 RNU1-96P-201ENST00000364163 162 ntBASIC1.37□□□□□ -2.19
CASP4P49662 Y_RNA.231-201ENST00000364358 102 ntBASIC1.37□□□□□ -2.19
CASP4P49662 RNU6-877P-201ENST00000383868 107 ntBASIC1.37□□□□□ -2.19
CASP4P49662 MIR1283-1-201ENST00000408494 87 ntBASIC1.37□□□□□ -2.19
CASP4P49662 RNA5SP494-201ENST00000410653 129 ntBASIC1.37□□□□□ -2.19
CASP4P49662 C8orf59P1-201ENST00000429930 303 ntBASIC1.37□□□□□ -2.19
CASP4P49662 MRPS10P2-201ENST00000431226 381 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.37□□□□□ -2.19
CASP4P49662 HSPE1P9-201ENST00000440046 311 ntBASIC1.37□□□□□ -2.19
CASP4P49662 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.37□□□□□ -2.19
CASP4P49662 RPL26P26-201ENST00000480251 434 ntBASIC1.37□□□□□ -2.19
CASP4P49662 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
CASP4P49662 Y_RNA.693-201ENST00000516641 110 ntBASIC1.37□□□□□ -2.19
CASP4P49662 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AC090821.2-201ENST00000523552 176 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.37□□□□□ -2.19
CASP4P49662 DEFB131C-201ENST00000528817 165 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.37□□□□□ -2.19
CASP4P49662 AC100830.2-201ENST00000581636 240 ntBASIC1.37□□□□□ -2.19
CASP4P49662 FGF7P1-201ENST00000582820 288 ntBASIC1.37□□□□□ -2.19
CASP4P49662 NBR2-204ENST00000587322 63 ntBASIC1.37□□□□□ -2.19
CASP4P49662 Z99129.1-201ENST00000612510 255 ntBASIC1.37□□□□□ -2.19
CASP4P49662 TCL6_2.1-201ENST00000615162 119 ntBASIC1.37□□□□□ -2.19
CASP4P49662 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AC124864.2-201ENST00000624736 186 ntBASIC1.37□□□□□ -2.19
CASP4P49662 AC068205.3-201ENST00000636385 468 ntBASIC1.37□□□□□ -2.19
CASP4P49662 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CASP4P49662 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CASP4P49662 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CASP4P49662 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CASP4P49662 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CASP4P49662 Y_RNA.51-201ENST00000362725 102 ntBASIC1.36□□□□□ -2.19
CASP4P49662 Y_RNA.123-201ENST00000363338 102 ntBASIC1.36□□□□□ -2.19
CASP4P49662 RNU6-968P-201ENST00000384076 107 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.36□□□□□ -2.19
CASP4P49662 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
CASP4P49662 MTCO3P29-201ENST00000432119 779 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC099677.2-201ENST00000436385 175 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AL603825.1-201ENST00000438481 80 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC074290.1-201ENST00000448883 135 ntBASIC1.36□□□□□ -2.19
CASP4P49662 MTCO1P29-201ENST00000496868 288 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.36□□□□□ -2.19
CASP4P49662 AC092436.3-201ENST00000511788 257 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.36□□□□□ -2.19
CASP4P49662 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.36□□□□□ -2.19
CASP4P49662 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CASP4P49662 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
CASP4P49662 PIGPP4-201ENST00000584447 307 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AC004492.1-201ENST00000607036 742 ntBASIC1.36□□□□□ -2.19
CASP4P49662 AL353149.1-201ENST00000610667 244 ntBASIC1.36□□□□□ -2.19
CASP4P49662 OR5AK4P-201ENST00000635912 903 ntBASIC1.36□□□□□ -2.19
CASP4P49662 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CASP4P49662 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
CASP4P49662 RNU6-522P-201ENST00000364497 107 ntBASIC1.35□□□□□ -2.19
CASP4P49662 RNU2-16P-201ENST00000410712 136 ntBASIC1.35□□□□□ -2.19
CASP4P49662 RNU6-325P-201ENST00000411132 105 ntBASIC1.35□□□□□ -2.19
CASP4P49662 SNRPEP10-201ENST00000420249 274 ntBASIC1.35□□□□□ -2.19
CASP4P49662 MTCO1P20-201ENST00000425366 358 ntBASIC1.35□□□□□ -2.19
CASP4P49662 CST2P1-201ENST00000425770 87 ntBASIC1.35□□□□□ -2.19
CASP4P49662 USP9YP14-201ENST00000430663 563 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AC245047.4-201ENST00000433189 144 ntBASIC1.35□□□□□ -2.19
CASP4P49662 SEPT14P3-201ENST00000439401 183 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AL732372.2-207ENST00000445840 183 ntBASIC1.35□□□□□ -2.19
CASP4P49662 SEPT14P2-201ENST00000453405 183 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.35□□□□□ -2.19
CASP4P49662 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.35□□□□□ -2.19
CASP4P49662 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.35□□□□□ -2.19
CASP4P49662 AC107401.1-201ENST00000503426 685 ntBASIC1.35□□□□□ -2.19
CASP4P49662 SEPT14P4-201ENST00000513445 186 ntBASIC1.35□□□□□ -2.19
CASP4P49662 RNA5SP445-201ENST00000515889 115 ntBASIC1.35□□□□□ -2.19
CASP4P49662 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.35□□□□□ -2.19
CASP4P49662 FO082796.1-201ENST00000523795 183 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.35□□□□□ -2.19
CASP4P49662 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.35□□□□□ -2.19
CASP4P49662 CPDP1-201ENST00000579660 283 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AC016727.2-201ENST00000603988 621 ntBASIC1.35□□□□□ -2.19
CASP4P49662 CTHRC1P1-201ENST00000605383 469 ntBASIC1.35□□□□□ -2.19
CASP4P49662 MIR8076-201ENST00000611401 83 ntBASIC1.35□□□□□ -2.19
CASP4P49662 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
CASP4P49662 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.35□□□□□ -2.19
CASP4P49662 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.35□□□□□ -2.19
CASP4P49662 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.35□□□□□ -2.19
CASP4P49662 AC068137.3-201ENST00000639191 341 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms