Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL12P48061 AC005741.1-201ENST00000511094 432 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 SNORA19.2-201ENST00000516013 114 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 Y_RNA.704-201ENST00000516851 102 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 SNORD60.2-201ENST00000516883 86 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCL12P48061 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCL12P48061 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL12P48061 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.25□□□□□ -2.21
CXCL12P48061 AC073534.2-201ENST00000620377 381 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 U1.36-201ENST00000620684 176 ntBASIC1.25□□□□□ -2.21
CXCL12P48061 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL12P48061 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CXCL12P48061 RNU6-227P-201ENST00000362865 103 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 Y_RNA.372-201ENST00000365599 102 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 RNU6-1080P-201ENST00000383982 107 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 MIR598-201ENST00000384868 97 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CXCL12P48061 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 MIR548J-201ENST00000408833 112 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC123900.1-201ENST00000420390 96 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 EIF4EP2-201ENST00000422816 654 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 MRPS10P2-201ENST00000431226 381 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL12P48061 RNU7-14P-201ENST00000459331 62 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC130509.1-201ENST00000464158 433 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC083904.1-201ENST00000487828 231 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC019235.1-201ENST00000503847 207 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC091885.1-201ENST00000506658 268 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL12P48061 RNU5F-4P-201ENST00000516581 114 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL12P48061 AL157687.1-201ENST00000554853 619 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC022254.1-201ENST00000567857 235 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC090517.1-201ENST00000569307 266 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 MIR3198-2-201ENST00000577868 80 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC009994.1-201ENST00000606889 253 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC092954.2-201ENST00000609103 430 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC005520.5-201ENST00000613926 164 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC048344.4-201ENST00000619744 527 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 PVT1_3.1-201ENST00000620853 95 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
CXCL12P48061 Y_RNA.41-201ENST00000362646 102 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 Y_RNA.194-201ENST00000363985 102 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-522P-201ENST00000364497 107 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-438P-201ENST00000365561 103 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 SNORA32.2-201ENST00000384049 122 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-483P-201ENST00000384088 108 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-1093P-201ENST00000391194 107 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.23□□□□□ -2.21
CXCL12P48061 AC139712.2-201ENST00000424302 339 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL12P48061 DLGAP5P1-201ENST00000430307 464 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AL359672.1-201ENST00000442302 409 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AL357134.1-201ENST00000445848 426 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-1332P-201ENST00000516666 104 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.23□□□□□ -2.21
CXCL12P48061 AC024909.2-201ENST00000553035 286 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 SCOCP1-201ENST00000554676 349 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.23□□□□□ -2.21
CXCL12P48061 MIR4713-201ENST00000582691 75 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 RNU6-89P-201ENST00000606519 100 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 AC103810.8-201ENST00000607347 118 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 FAM157A-202ENST00000615155 405 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 MIR6779-201ENST00000617283 64 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 FER-210ENST00000628534 558 ntTSL 5 BASIC1.23□□□□□ -2.21
CXCL12P48061 AC245060.5-201ENST00000610778 3293 ntBASIC1.23□□□□□ -2.21
CXCL12P48061 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CXCL12P48061 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CXCL12P48061 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 Y_RNA.36-201ENST00000362602 112 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 Y_RNA.231-201ENST00000364358 102 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CXCL12P48061 EIF4E2P1-201ENST00000393781 255 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 RNA5SP100-201ENST00000410903 110 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 RNA5SP59-201ENST00000410922 110 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 AC009310.1-201ENST00000414414 451 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 SNRPEP10-201ENST00000420249 274 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL12P48061 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.22□□□□□ -2.21
CXCL12P48061 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL12P48061 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL12P48061 RNU6-1281P-201ENST00000516223 105 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 DEFB131C-201ENST00000528817 165 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 MRPS36P4-201ENST00000534436 298 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.22□□□□□ -2.21
CXCL12P48061 AC010525.2-201ENST00000590920 195 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 AC064807.4-201ENST00000607201 407 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.22□□□□□ -2.21
CXCL12P48061 AC121333.1-201ENST00000567488 2709 ntBASIC1.21□□□□□ -2.22
CXCL12P48061 CBX3P1-201ENST00000325243 554 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms