Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.44□□□□□ -2.02
PTPN9P43378 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.44□□□□□ -2.02
PTPN9P43378 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 USP9YP23-201ENST00000455085 407 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 TOMM22P6-201ENST00000465035 409 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AC090096.1-201ENST00000489168 390 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AC105758.1-201ENST00000506038 399 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 RNU6-475P-201ENST00000516073 104 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AC020661.2-201ENST00000560114 134 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AL356055.1-201ENST00000602528 446 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 SNRPGP20-201ENST00000604477 205 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 AC087588.2-201ENST00000617667 426 ntBASIC2.44□□□□□ -2.02
PTPN9P43378 RNU6-280P-201ENST00000364145 104 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 RNA5SP213-201ENST00000391031 106 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR1294-201ENST00000408503 142 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 PMCHL1-202ENST00000423102 261 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN9P43378 AP000870.1-201ENST00000472927 406 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 Y_RNA.711-201ENST00000516993 102 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 AC022616.8-201ENST00000533569 253 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN9P43378 AC016727.2-201ENST00000603988 621 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 AL355297.2-201ENST00000604792 129 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR1244-1-201ENST00000612829 85 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 AC138305.3-201ENST00000624988 240 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR1244-3-201ENST00000635744 85 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR1244-2-201ENST00000636449 85 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 MIR1244-4-202ENST00000636813 85 ntBASIC2.43□□□□□ -2.02
PTPN9P43378 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PTPN9P43378 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN9P43378 Y_RNA.28-201ENST00000362554 111 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 Y_RNA.39-201ENST00000362620 98 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RNU1-76P-201ENST00000362903 159 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RNU4-42P-201ENST00000364738 142 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 Y_RNA.314-201ENST00000365114 102 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 AC117470.1-201ENST00000381974 330 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RNU6-26P-201ENST00000383985 107 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RNU6-546P-201ENST00000383991 107 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 MIR144-201ENST00000384886 86 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 MIR10B-201ENST00000385011 110 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 Y_RNA.592-201ENST00000410274 109 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 AC096638.1-201ENST00000444678 216 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RN7SKP295-201ENST00000517264 153 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN9P43378 GNAI2P1-201ENST00000541815 315 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.42□□□□□ -2.02
PTPN9P43378 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.42□□□□□ -2.02
PTPN9P43378 MIR3171-201ENST00000584270 74 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 TCL6_2.1-201ENST00000615162 119 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 AC005562.2-201ENST00000618264 111 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.42□□□□□ -2.02
PTPN9P43378 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN9P43378 MTND5P16-201ENST00000460269 1703 ntBASIC2.42□□□□□ -2.02
PTPN9P43378 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 RNY1P14-201ENST00000384426 108 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 RNU6-1072P-201ENST00000384703 107 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 RNU6-443P-201ENST00000384780 107 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 SNORA12-201ENST00000391162 147 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 MCFD2P1-201ENST00000417812 300 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.41□□□□□ -2.02
PTPN9P43378 EIF1P2-201ENST00000428233 350 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 AC018634.1-201ENST00000437554 401 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 MTND4P19-201ENST00000446659 478 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 Y_RNA.661-201ENST00000516003 99 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 HSPE1P18-201ENST00000517602 280 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.41□□□□□ -2.02
PTPN9P43378 AC090517.1-201ENST00000569307 266 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 VN1R91P-201ENST00000594377 169 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 AC092447.9-201ENST00000603395 144 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.41□□□□□ -2.02
PTPN9P43378 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.41□□□□□ -2.02
PTPN9P43378 AL606534.2-204ENST00000635008 178 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 MIR4272-201ENST00000635924 64 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 MIR203B-201ENST00000636080 86 ntBASIC2.41□□□□□ -2.02
PTPN9P43378 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN9P43378 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN9P43378 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.41□□□□□ -2.02
PTPN9P43378 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
PTPN9P43378 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
PTPN9P43378 RNU1-62P-201ENST00000362599 164 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 Y_RNA.80-201ENST00000362996 102 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 SNORA38-201ENST00000363946 132 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 RNU2-32P-201ENST00000411193 191 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 AC114482.1-201ENST00000418010 247 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
PTPN9P43378 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 RNU7-26P-201ENST00000458980 63 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.4□□□□□ -2.03
PTPN9P43378 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 SNORA40.14-201ENST00000516543 86 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 RNU6-344P-201ENST00000516635 111 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 RNU6-988P-201ENST00000519081 107 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 MIR4513-201ENST00000581077 86 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
PTPN9P43378 IGHVIII-44-202ENST00000636235 289 ntBASIC2.4□□□□□ -2.03
PTPN9P43378 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms