Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.28□□□□□ -2.2
SSR1P43307 DYNLT3P2-201ENST00000442517 295 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU6-1037P-201ENST00000459571 107 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AF186996.7-201ENST00000492781 209 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AC092436.3-201ENST00000511788 257 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
SSR1P43307 RNU6-1069P-201ENST00000516612 133 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.28□□□□□ -2.2
SSR1P43307 MTND1P15-201ENST00000579262 949 ntBASIC1.28□□□□□ -2.2
SSR1P43307 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
SSR1P43307 Z99497.2-201ENST00000603634 310 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AC104458.1-201ENST00000608243 463 ntBASIC1.28□□□□□ -2.2
SSR1P43307 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
SSR1P43307 MIR338-201ENST00000636369 67 ntBASIC1.28□□□□□ -2.2
SSR1P43307 BX322639.1-202ENST00000423987 2213 ntBASIC1.27□□□□□ -2.21
SSR1P43307 Y_RNA.553-201ENST00000384670 102 ntBASIC1.27□□□□□ -2.21
SSR1P43307 RNU4-55P-201ENST00000410731 137 ntBASIC1.27□□□□□ -2.21
SSR1P43307 RNU6-325P-201ENST00000411132 105 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.27□□□□□ -2.21
SSR1P43307 AC010493.1-201ENST00000513479 292 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.27□□□□□ -2.21
SSR1P43307 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.27□□□□□ -2.21
SSR1P43307 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AP000907.4-201ENST00000604143 237 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AL365434.2-201ENST00000607979 234 ntBASIC1.27□□□□□ -2.21
SSR1P43307 AC139792.3-201ENST00000623525 224 ntBASIC1.27□□□□□ -2.21
SSR1P43307 OR5AK4P-201ENST00000635912 903 ntBASIC1.27□□□□□ -2.21
SSR1P43307 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SSR1P43307 RNU5B-2P-201ENST00000363036 113 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNU6-1329P-201ENST00000365664 107 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNU6-1103P-201ENST00000384150 107 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNY3P9-201ENST00000384727 106 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNA5SP109-201ENST00000391010 116 ntBASIC1.26□□□□□ -2.21
SSR1P43307 RNA5SP467-201ENST00000391274 118 ntBASIC1.26□□□□□ -2.21
SSR1P43307 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
SSR1P43307 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.26□□□□□ -2.21
SSR1P43307 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
SSR1P43307 MRPS10P2-201ENST00000431226 381 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AL606517.2-201ENST00000442855 241 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC010424.1-201ENST00000506336 297 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC079140.3-201ENST00000511111 550 ntBASIC1.26□□□□□ -2.21
SSR1P43307 SNORA40.12-201ENST00000516329 111 ntBASIC1.26□□□□□ -2.21
SSR1P43307 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.26□□□□□ -2.21
SSR1P43307 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SSR1P43307 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.26□□□□□ -2.21
SSR1P43307 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.26□□□□□ -2.21
SSR1P43307 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.26□□□□□ -2.21
SSR1P43307 AC008088.1-201ENST00000580993 280 ntBASIC1.26□□□□□ -2.21
SSR1P43307 MIR4753-201ENST00000585119 83 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC087683.1-201ENST00000591187 441 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC068792.1-201ENST00000621354 417 ntBASIC1.26□□□□□ -2.21
SSR1P43307 AC005609.4-201ENST00000625071 447 ntBASIC1.26□□□□□ -2.21
SSR1P43307 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.26□□□□□ -2.21
SSR1P43307 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RNU6-562P-201ENST00000362731 107 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RNU6-1305P-201ENST00000364353 104 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RNU6-968P-201ENST00000384076 107 ntBASIC1.25□□□□□ -2.21
SSR1P43307 MIR521-1-201ENST00000384902 87 ntBASIC1.25□□□□□ -2.21
SSR1P43307 DEFB108C-201ENST00000400154 252 ntBASIC1.25□□□□□ -2.21
SSR1P43307 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AL161935.2-201ENST00000414627 60 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC010154.1-201ENST00000425857 269 ntBASIC1.25□□□□□ -2.21
SSR1P43307 MTCO2P16-201ENST00000436962 677 ntBASIC1.25□□□□□ -2.21
SSR1P43307 HMGN2P34-201ENST00000437647 269 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC067942.3-201ENST00000512025 362 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RNU6-1332P-201ENST00000516666 104 ntBASIC1.25□□□□□ -2.21
SSR1P43307 SNORD60.2-201ENST00000516883 86 ntBASIC1.25□□□□□ -2.21
SSR1P43307 RAB11AP2-201ENST00000545905 639 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.25□□□□□ -2.21
SSR1P43307 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.25□□□□□ -2.21
SSR1P43307 AC015688.6-201ENST00000577737 104 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.25□□□□□ -2.21
SSR1P43307 MIR3660-201ENST00000584845 100 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC097065.2-201ENST00000608159 533 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC092807.2-201ENST00000609367 243 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
SSR1P43307 AC078883.4-201ENST00000623218 367 ntBASIC1.25□□□□□ -2.21
SSR1P43307 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.25□□□□□ -2.21
SSR1P43307 ELL2P3-201ENST00000457883 1602 ntBASIC1.25□□□□□ -2.21
SSR1P43307 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SSR1P43307 RNU6-1106P-201ENST00000390845 107 ntBASIC1.24□□□□□ -2.21
SSR1P43307 RNU6-57P-201ENST00000411348 103 ntBASIC1.24□□□□□ -2.21
SSR1P43307 snoU13.27-201ENST00000459278 104 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC083904.1-201ENST00000487828 231 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC093852.1-201ENST00000503587 266 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC079140.5-201ENST00000507882 310 ntBASIC1.24□□□□□ -2.21
SSR1P43307 RN7SKP298-201ENST00000515950 94 ntBASIC1.24□□□□□ -2.21
SSR1P43307 RNU1-117P-201ENST00000517041 158 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.24□□□□□ -2.21
SSR1P43307 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.24□□□□□ -2.21
SSR1P43307 AL157687.1-201ENST00000554853 619 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC146944.4-201ENST00000602697 718 ntBASIC1.24□□□□□ -2.21
SSR1P43307 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms