Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.53□□□□□ -2.49
HTTP42858 SNORD83.1-201ENST00000411362 77 ntBASIC-0.53□□□□□ -2.49
HTTP42858 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.53□□□□□ -2.49
HTTP42858 MTCO3P1-205ENST00000422088 832 ntBASIC-0.53□□□□□ -2.49
HTTP42858 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.53□□□□□ -2.49
HTTP42858 MTND4P32-201ENST00000437189 1237 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC093019.1-201ENST00000443135 252 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC087499.4-201ENST00000448505 178 ntBASIC-0.53□□□□□ -2.49
HTTP42858 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.53□□□□□ -2.49
HTTP42858 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.53□□□□□ -2.49
HTTP42858 SNORA72.1-201ENST00000363485 129 ntBASIC-0.53□□□□□ -2.49
HTTP42858 RNU6-622P-201ENST00000384272 103 ntBASIC-0.53□□□□□ -2.49
HTTP42858 ELOCP21-201ENST00000412558 336 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC104073.1-201ENST00000451988 151 ntBASIC-0.53□□□□□ -2.49
HTTP42858 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.53□□□□□ -2.49
HTTP42858 AC008628.1-201ENST00000508663 265 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC110760.3-202ENST00000515177 371 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC023442.1-201ENST00000531247 422 ntBASIC-0.53□□□□□ -2.49
HTTP42858 MIR548AD-201ENST00000584780 82 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AL391903.3-201ENST00000612158 163 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AC105081.1-201ENST00000617727 106 ntBASIC-0.53□□□□□ -2.49
HTTP42858 RNU4-36P-201ENST00000364294 144 ntBASIC-0.53□□□□□ -2.49
HTTP42858 MIR196A1-201ENST00000388006 70 ntBASIC-0.53□□□□□ -2.49
HTTP42858 SNORD111-201ENST00000408139 94 ntBASIC-0.53□□□□□ -2.49
HTTP42858 TPMTP2-201ENST00000414372 726 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.53□□□□□ -2.49
HTTP42858 AC092656.1-203ENST00000624134 423 ntBASIC-0.53□□□□□ -2.49
HTTP42858 AL359697.1-201ENST00000624879 587 ntBASIC-0.53□□□□□ -2.49
HTTP42858 RNU4-16P-201ENST00000364737 141 ntBASIC-0.54□□□□□ -2.5
HTTP42858 SNORD83B-201ENST00000386745 93 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MIR1305-201ENST00000408300 86 ntBASIC-0.54□□□□□ -2.5
HTTP42858 RPL21P38-201ENST00000418090 167 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MTCO2P1-201ENST00000424648 477 ntBASIC-0.54□□□□□ -2.5
HTTP42858 AC006210.1-201ENST00000424882 111 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MED13P1-201ENST00000428342 171 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MTND4P15-201ENST00000437913 1033 ntBASIC-0.54□□□□□ -2.5
HTTP42858 RN7SKP164-201ENST00000516138 266 ntBASIC-0.54□□□□□ -2.5
HTTP42858 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
HTTP42858 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.54□□□□□ -2.5
HTTP42858 RNU6-199P-201ENST00000362954 107 ntBASIC-0.54□□□□□ -2.5
HTTP42858 RNU6-161P-201ENST00000363051 106 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MIR454-201ENST00000390180 115 ntBASIC-0.54□□□□□ -2.5
HTTP42858 MIR548L-201ENST00000408303 86 ntBASIC-0.54□□□□□ -2.5
HTTP42858 FO393419.3-201ENST00000428741 282 ntBASIC-0.54□□□□□ -2.5
HTTP42858 AC117525.1-201ENST00000515228 503 ntBASIC-0.54□□□□□ -2.5
HTTP42858 SNORA25.18-201ENST00000607153 114 ntBASIC-0.54□□□□□ -2.5
HTTP42858 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNA5SP95-201ENST00000410319 137 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.55□□□□□ -2.5
HTTP42858 AC007919.1-201ENST00000429380 217 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.55□□□□□ -2.5
HTTP42858 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.55□□□□□ -2.5
HTTP42858 AC116562.3-201ENST00000506136 177 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.55□□□□□ -2.5
HTTP42858 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.55□□□□□ -2.5
HTTP42858 U6.99-201ENST00000637524 83 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.55□□□□□ -2.5
HTTP42858 MIR186-201ENST00000384988 86 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNU6-370P-201ENST00000411008 104 ntBASIC-0.55□□□□□ -2.5
HTTP42858 USP9YP21-201ENST00000420603 432 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.55□□□□□ -2.5
HTTP42858 AL133396.1-201ENST00000432048 687 ntBASIC-0.55□□□□□ -2.5
HTTP42858 snoU13.27-201ENST00000459278 104 ntBASIC-0.55□□□□□ -2.5
HTTP42858 BCRP9-201ENST00000605312 388 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC063943.3-201ENST00000615562 356 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC010133.1-201ENST00000615809 842 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNU4-30P-201ENST00000410245 143 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNU6-57P-201ENST00000411348 103 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.55□□□□□ -2.5
HTTP42858 AC025678.1-201ENST00000567861 338 ntBASIC-0.55□□□□□ -2.5
HTTP42858 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.55□□□□□ -2.5
HTTP42858 BNIP3P24-201ENST00000593398 557 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AL162424.1-201ENST00000602325 221 ntBASIC-0.55□□□□□ -2.5
HTTP42858 AL590396.2-201ENST00000636511 1041 ntBASIC-0.55□□□□□ -2.5
HTTP42858 RNY1P7-201ENST00000384743 110 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.56□□□□□ -2.5
HTTP42858 DEFB130D-201ENST00000426866 237 ntBASIC-0.56□□□□□ -2.5
HTTP42858 USP9YP11-201ENST00000427537 717 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.56□□□□□ -2.5
HTTP42858 MED28P2-201ENST00000475771 317 ntBASIC-0.56□□□□□ -2.5
HTTP42858 RNU2-53P-201ENST00000516257 147 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.56□□□□□ -2.5
HTTP42858 AC034229.4-201ENST00000607861 441 ntBASIC-0.56□□□□□ -2.5
HTTP42858 RNU4-76P-201ENST00000364509 141 ntBASIC-0.56□□□□□ -2.5
HTTP42858 RNU6-480P-201ENST00000384332 107 ntBASIC-0.56□□□□□ -2.5
HTTP42858 SNORD116-20-201ENST00000384529 92 ntBASIC-0.56□□□□□ -2.5
HTTP42858 MIR1827-201ENST00000408549 66 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.56□□□□□ -2.5
HTTP42858 PCNPP5-201ENST00000452246 481 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
HTTP42858 RN7SKP19-201ENST00000516016 252 ntBASIC-0.56□□□□□ -2.5
HTTP42858 MIR2115-201ENST00000516657 100 ntBASIC-0.56□□□□□ -2.5
HTTP42858 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.56□□□□□ -2.5
HTTP42858 DEFB131D-201ENST00000526803 184 ntBASIC-0.56□□□□□ -2.5
HTTP42858 DEFB131C-201ENST00000528817 165 ntBASIC-0.56□□□□□ -2.5
HTTP42858 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
HTTP42858 AL136363.2-201ENST00000604173 851 ntBASIC-0.56□□□□□ -2.5
HTTP42858 AC135803.1-201ENST00000608748 565 ntBASIC-0.56□□□□□ -2.5
HTTP42858 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.57□□□□□ -2.5
HTTP42858 RNU6-428P-201ENST00000362942 107 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms