Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 MIR4324-201ENST00000584846 72 ntBASIC-1.33□□□□□ -2.62
CPS1P31327 SNORD113.3-201ENST00000364630 78 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.34□□□□□ -2.62
CPS1P31327 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.34□□□□□ -2.62
CPS1P31327 AC010154.1-201ENST00000425857 269 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
CPS1P31327 SCARNA17-201ENST00000516183 144 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 AL390123.1-201ENST00000603216 237 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 AC246785.4-201ENST00000605374 287 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 AL356596.1-201ENST00000624230 379 ntBASIC-1.34□□□□□ -2.62
CPS1P31327 RNU6-858P-201ENST00000362436 107 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNY4P6-201ENST00000363667 96 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNU6-188P-201ENST00000364207 107 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNU6-652P-201ENST00000365488 107 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNU6-438P-201ENST00000365561 103 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNU6-622P-201ENST00000384272 103 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 RNU4-30P-201ENST00000410245 143 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.35□□□□□ -2.62
CPS1P31327 AC069271.1-201ENST00000445577 156 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.35□□□□□ -2.62
CPS1P31327 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.35□□□□□ -2.62
CPS1P31327 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-1.35□□□□□ -2.62
CPS1P31327 AC004584.2-201ENST00000570407 410 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 AC093875.1-201ENST00000623688 504 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 MIR499B-201ENST00000636498 73 ntBASIC-1.35□□□□□ -2.62
CPS1P31327 MIR660-201ENST00000385235 97 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 MIR760-201ENST00000390220 80 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 MIR1285-2-201ENST00000408311 88 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.35□□□□□ -2.63
CPS1P31327 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-1.35□□□□□ -2.63
CPS1P31327 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-1.35□□□□□ -2.63
CPS1P31327 AC011451.2-201ENST00000604303 598 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.35□□□□□ -2.63
CPS1P31327 AL355073.2-201ENST00000612106 557 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 AC098679.4-201ENST00000624241 654 ntBASIC-1.35□□□□□ -2.63
CPS1P31327 SNORD114-14-201ENST00000362723 75 ntBASIC-1.36□□□□□ -2.63
CPS1P31327 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.36□□□□□ -2.63
CPS1P31327 AC019178.2-201ENST00000423595 505 ntBASIC-1.36□□□□□ -2.63
CPS1P31327 AC109327.2-201ENST00000448339 378 ntBASIC-1.36□□□□□ -2.63
CPS1P31327 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.36□□□□□ -2.63
CPS1P31327 BNIP3P30-201ENST00000601184 574 ntBASIC-1.36□□□□□ -2.63
CPS1P31327 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 AC117525.1-201ENST00000515228 503 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 SNORA31.10-201ENST00000516482 106 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 SNORA59B-202ENST00000578183 701 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 MIR3192-201ENST00000584920 77 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 MIR4436A-201ENST00000585278 85 ntBASIC-1.37□□□□□ -2.63
CPS1P31327 MIR1185-1-201ENST00000408598 86 ntBASIC-1.38□□□□□ -2.63
CPS1P31327 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.38□□□□□ -2.63
CPS1P31327 USP9YP25-201ENST00000457708 443 ntBASIC-1.38□□□□□ -2.63
CPS1P31327 OR8K2P-201ENST00000524645 927 ntBASIC-1.38□□□□□ -2.63
CPS1P31327 AC023050.3-201ENST00000541142 333 ntBASIC-1.38□□□□□ -2.63
CPS1P31327 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.38□□□□□ -2.63
CPS1P31327 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.38□□□□□ -2.63
CPS1P31327 RNU6-212P-201ENST00000362642 104 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 SNORD32B-201ENST00000364460 84 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-1.39□□□□□ -2.63
CPS1P31327 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-1.39□□□□□ -2.63
CPS1P31327 RPL17P19-201ENST00000489069 552 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 AC107401.1-201ENST00000503426 685 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 RNU2-46P-201ENST00000517038 113 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 AC021231.3-201ENST00000558497 370 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 AC131159.1-201ENST00000621854 213 ntBASIC-1.39□□□□□ -2.63
CPS1P31327 SNORD114-11-201ENST00000363738 75 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 SNORA12.2-201ENST00000391040 156 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 ZNF885P-201ENST00000420174 1098 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 MTCO2P7-201ENST00000446518 666 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 AL356094.1-201ENST00000624663 1212 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 FER-210ENST00000628534 558 ntTSL 5 BASIC-1.4□□□□□ -2.63
CPS1P31327 RNU6-369P-201ENST00000362515 102 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 MIR548L-201ENST00000408303 86 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.4□□□□□ -2.63
CPS1P31327 AC013262.1-201ENST00000426710 252 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 RNU5F-2P-201ENST00000516066 82 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 MRPS36P4-201ENST00000534436 298 ntBASIC-1.4□□□□□ -2.63
CPS1P31327 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.41□□□□□ -2.64
CPS1P31327 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.41□□□□□ -2.64
CPS1P31327 AL356583.2-201ENST00000426536 280 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AC133104.1-201ENST00000429100 218 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AC005345.1-201ENST00000431868 217 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-1.41□□□□□ -2.64
CPS1P31327 USP9YP29-201ENST00000445112 563 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AC107297.1-201ENST00000459991 176 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 SNORA27.4-201ENST00000516650 95 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AC018462.2-201ENST00000605375 395 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 AC091304.9-201ENST00000612091 226 ntBASIC-1.41□□□□□ -2.64
CPS1P31327 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
CPS1P31327 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.42□□□□□ -2.64
CPS1P31327 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 DEFB131D-201ENST00000526803 184 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 DEFB131C-201ENST00000528817 165 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.42□□□□□ -2.64
CPS1P31327 SNRPGP1-201ENST00000553864 222 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 MIR4778-201ENST00000577635 80 ntBASIC-1.42□□□□□ -2.64
CPS1P31327 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.42□□□□□ -2.64
CPS1P31327 SNORA36.1-201ENST00000363424 132 ntBASIC-1.43□□□□□ -2.64
CPS1P31327 RNA5SP192-201ENST00000364404 120 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms