Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC12P31275 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 SCARNA15.3-201ENST00000626315 122 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 SCARNA4.1-201ENST00000628597 123 ntBASIC3.25□□□□□ -1.89
HOXC12P31275 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC12P31275 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC12P31275 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC12P31275 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC12P31275 RNA5SP51-201ENST00000364750 119 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 RNU6-1062P-201ENST00000383908 107 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 MIR548B-201ENST00000385247 97 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 RNU6-1248P-201ENST00000391096 64 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 SUMO1P3-201ENST00000439961 304 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC12P31275 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC12P31275 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.24□□□□□ -1.89
HOXC12P31275 AP002392.1-201ENST00000537692 208 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 CBX3P4-201ENST00000538909 354 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXC12P31275 AL365434.2-201ENST00000607979 234 ntBASIC3.24□□□□□ -1.89
HOXC12P31275 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC12P31275 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC12P31275 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXC12P31275 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HOXC12P31275 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXC12P31275 U3.8-201ENST00000363675 217 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 Y_RNA.217-201ENST00000364214 105 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 RNU6-1274P-201ENST00000384557 107 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 AC024067.1-201ENST00000426199 223 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 RPL30P4-201ENST00000429309 333 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 TOMM22P2-201ENST00000430735 237 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 SNORD105B-201ENST00000458770 79 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 RNU7-14P-201ENST00000459331 62 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 Y_RNA.641-201ENST00000459414 105 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 AC107393.1-201ENST00000512403 346 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXC12P31275 MIR4513-201ENST00000581077 86 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXC12P31275 AC011921.3-201ENST00000605540 361 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 AC073349.3-201ENST00000617616 186 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 snoU18.1-201ENST00000629629 71 ntBASIC3.23□□□□□ -1.89
HOXC12P31275 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HOXC12P31275 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC12P31275 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC12P31275 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.22□□□□□ -1.89
HOXC12P31275 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC12P31275 RNU6-545P-201ENST00000362681 104 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 RNU6-944P-201ENST00000364023 107 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 ATP5A1P2-201ENST00000412323 255 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 SEM1P1-201ENST00000506694 209 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 SCARNA3-201ENST00000517097 143 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 RNU6-586P-201ENST00000517265 104 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC12P31275 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.22□□□□□ -1.89
HOXC12P31275 MIR3199-1-201ENST00000582434 88 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 AC023043.3-201ENST00000593113 385 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 Z83818.1-201ENST00000603584 150 ntBASIC3.22□□□□□ -1.89
HOXC12P31275 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC12P31275 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC12P31275 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HOXC12P31275 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HOXC12P31275 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC12P31275 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC12P31275 AC138915.1-201ENST00000565427 1685 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC12P31275 RNU1-72P-201ENST00000362976 153 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC12P31275 SNORD2.1-201ENST00000458762 69 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 AC090515.1-201ENST00000465295 476 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 RN7SL807P-201ENST00000470923 297 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 SRIP1-201ENST00000489235 288 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC12P31275 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC12P31275 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
HOXC12P31275 AL713866.2-201ENST00000603579 219 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 MIR486-1-201ENST00000612171 68 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 AP003355.3-201ENST00000623465 114 ntBASIC3.21□□□□□ -1.9
HOXC12P31275 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC12P31275 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC12P31275 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC12P31275 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC12P31275 RNU6-1020P-201ENST00000363684 107 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 RNA5SP50-201ENST00000363731 107 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 RNU6-886P-201ENST00000384319 105 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 MIR490-201ENST00000384865 128 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 MIR586-201ENST00000385035 97 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
HOXC12P31275 MICF-203ENST00000432679 129 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 643.6 ms