Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.17□□□□□ -2.22
COL8A2P25067 MTND4LP16-201ENST00000440828 295 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC092473.1-201ENST00000441098 221 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.17□□□□□ -2.22
COL8A2P25067 AC027575.1-201ENST00000481064 460 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC091874.1-201ENST00000511402 339 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.17□□□□□ -2.22
COL8A2P25067 RNU6-864P-201ENST00000516256 108 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 Y_RNA.676-201ENST00000516393 96 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 RNU6-567P-201ENST00000516746 107 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 SNORA31.16-201ENST00000516773 139 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AF235103.2-201ENST00000525753 346 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC021231.3-201ENST00000558497 370 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.17□□□□□ -2.22
COL8A2P25067 AC018638.8-201ENST00000588755 281 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC060780.3-201ENST00000589464 80 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.17□□□□□ -2.22
COL8A2P25067 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.17□□□□□ -2.22
COL8A2P25067 AL157834.3-201ENST00000615543 103 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AL136221.1-201ENST00000621449 509 ntBASIC1.17□□□□□ -2.22
COL8A2P25067 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.17□□□□□ -2.22
COL8A2P25067 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.17□□□□□ -2.22
COL8A2P25067 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
COL8A2P25067 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL8A2P25067 Y_RNA.86-201ENST00000363020 111 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-944P-201ENST00000364023 107 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 Y_RNA.212-201ENST00000364177 102 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 Y_RNA.248-201ENST00000364501 109 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-790P-201ENST00000384479 105 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-831P-201ENST00000384548 107 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-95P-201ENST00000384697 107 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR521-1-201ENST00000384902 87 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR597-201ENST00000384968 97 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR1262-201ENST00000408276 93 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR1283-2-201ENST00000408621 87 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 Y_RNA.597-201ENST00000410463 100 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU2-48P-201ENST00000410694 191 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-1148P-201ENST00000410992 104 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.16□□□□□ -2.22
COL8A2P25067 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.16□□□□□ -2.22
COL8A2P25067 CBX3P6-201ENST00000430257 527 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 USP9YP28-201ENST00000435142 589 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.16□□□□□ -2.22
COL8A2P25067 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.16□□□□□ -2.22
COL8A2P25067 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.16□□□□□ -2.22
COL8A2P25067 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL8A2P25067 PRELID3BP1-201ENST00000457142 540 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU7-187P-201ENST00000458985 68 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RPS29P27-201ENST00000463711 170 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC130509.1-201ENST00000464158 433 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC069439.1-201ENST00000494739 167 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC145146.1-201ENST00000496370 254 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-358P-201ENST00000516564 75 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-965P-201ENST00000516721 96 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 RNU6-273P-201ENST00000516937 96 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC018630.3-201ENST00000542637 96 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC016256.1-201ENST00000547971 354 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR3923-201ENST00000579521 83 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 CPDP1-201ENST00000579660 283 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR3672-201ENST00000584290 82 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 MIR3942-201ENST00000585264 109 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.16□□□□□ -2.22
COL8A2P25067 AC078795.3-201ENST00000602913 472 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 AC063943.3-201ENST00000615562 356 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 SNORA43.4-201ENST00000629559 138 ntBASIC1.16□□□□□ -2.22
COL8A2P25067 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
COL8A2P25067 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.16□□□□□ -2.22
COL8A2P25067 RNU4-15P-201ENST00000362613 141 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 Y_RNA.72-201ENST00000362894 103 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 Y_RNA.123-201ENST00000363338 102 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 Y_RNA.238-201ENST00000364441 102 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 SNORD116-11-201ENST00000383882 92 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 MIR29C-201ENST00000385231 88 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
COL8A2P25067 RNA5SP212-201ENST00000391223 107 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AL590632.1-201ENST00000424289 371 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.15□□□□□ -2.23
COL8A2P25067 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.15□□□□□ -2.23
COL8A2P25067 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.15□□□□□ -2.23
COL8A2P25067 HSPE1P24-201ENST00000450782 238 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 PCMTD1P1-201ENST00000455560 355 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.15□□□□□ -2.23
COL8A2P25067 AC022616.8-201ENST00000533569 253 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.15□□□□□ -2.23
COL8A2P25067 Z98751.3-201ENST00000604447 521 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AL133215.3-201ENST00000609801 448 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 MIR8076-201ENST00000611401 83 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AL359314.1-201ENST00000616913 261 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AC009248.2-201ENST00000619826 254 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
COL8A2P25067 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL8A2P25067 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL8A2P25067 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
COL8A2P25067 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL8A2P25067 MIR126-201ENST00000362291 85 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms