Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC026464.5-201ENST00000562497 722 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.15□□□□□ -2.07
CAPN3P20807 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.15□□□□□ -2.07
CAPN3P20807 AC083806.3-201ENST00000614016 455 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 AC009248.2-201ENST00000619826 254 ntBASIC2.15□□□□□ -2.07
CAPN3P20807 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CAPN3P20807 ZNF204P-201ENST00000416749 2397 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CAPN3P20807 Y_RNA.72-201ENST00000362894 103 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AC009310.1-201ENST00000414414 451 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.14□□□□□ -2.07
CAPN3P20807 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.14□□□□□ -2.07
CAPN3P20807 MTCO1P44-201ENST00000441935 243 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.14□□□□□ -2.07
CAPN3P20807 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.14□□□□□ -2.07
CAPN3P20807 MTND1P17-201ENST00000448961 204 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 MTCO3P8-201ENST00000453691 755 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AC010531.2-201ENST00000465012 153 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AC097473.1-201ENST00000508142 408 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 RNU6-344P-201ENST00000516635 111 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 SNORA44.1-201ENST00000517031 108 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 DEFB131C-201ENST00000528817 165 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 AC060780.3-201ENST00000589464 80 ntBASIC2.14□□□□□ -2.07
CAPN3P20807 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CAPN3P20807 Y_RNA.4-201ENST00000362333 112 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 Y_RNA.319-201ENST00000365138 92 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CAPN3P20807 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 RNU6-306P-201ENST00000384617 107 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 MIR586-201ENST00000385035 97 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 SNORA12.2-201ENST00000391040 156 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 PPP1R2P5-201ENST00000457256 603 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 RN7SKP210-201ENST00000459176 261 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.13□□□□□ -2.07
CAPN3P20807 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.13□□□□□ -2.07
CAPN3P20807 RNU7-175P-201ENST00000515915 61 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 RNU6-856P-201ENST00000516959 98 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 RRN3P3-201ENST00000549207 578 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 SNRPGP18-201ENST00000553000 214 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 AC011712.1-201ENST00000588959 234 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 AC122108.2-201ENST00000611946 526 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 MIR6128-201ENST00000615528 109 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 MIR6873-201ENST00000622788 63 ntBASIC2.13□□□□□ -2.07
CAPN3P20807 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CAPN3P20807 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CAPN3P20807 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CAPN3P20807 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-280P-201ENST00000364145 104 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-593P-201ENST00000364716 112 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-1235P-201ENST00000384559 107 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 EBAG9P1-201ENST00000418955 543 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 USMG5P1-201ENST00000425964 177 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.12□□□□□ -2.07
CAPN3P20807 FGF7P6-202ENST00000451282 293 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-498P-201ENST00000459468 107 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.12□□□□□ -2.07
CAPN3P20807 AC082651.2-201ENST00000496833 166 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC116337.1-201ENST00000509680 687 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-358P-201ENST00000516564 75 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 RNU6-1088P-201ENST00000516850 104 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.12□□□□□ -2.07
CAPN3P20807 MIR5696-201ENST00000578474 85 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.12□□□□□ -2.07
CAPN3P20807 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC069114.2-201ENST00000604699 304 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC092794.1-201ENST00000612734 582 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AC009831.4-201ENST00000620744 325 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
CAPN3P20807 ZNF299P-201ENST00000406845 1804 ntBASIC2.12□□□□□ -2.07
CAPN3P20807 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CAPN3P20807 Y_RNA.164-201ENST00000363709 102 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 U8.10-201ENST00000384260 133 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 RNU6-1148P-201ENST00000410992 104 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.11□□□□□ -2.07
CAPN3P20807 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.11□□□□□ -2.07
CAPN3P20807 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 HMGN2P23-201ENST00000456759 269 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 RNU6-329P-201ENST00000459618 107 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.11□□□□□ -2.07
CAPN3P20807 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.11□□□□□ -2.07
CAPN3P20807 RNU6-1146P-201ENST00000516282 102 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 RNVU1-2-201ENST00000516326 135 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.11□□□□□ -2.07
CAPN3P20807 SNORD11B-201ENST00000607707 90 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 AL078596.1-201ENST00000624856 447 ntBASIC2.11□□□□□ -2.07
CAPN3P20807 MIR340-201ENST00000362125 95 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 RNU6-1305P-201ENST00000364353 104 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 Y_RNA.301-201ENST00000364990 103 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AL356776.1-201ENST00000406574 447 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 MTND3P8-201ENST00000412909 339 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
CAPN3P20807 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms