Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 IGKV3-31-201ENST00000523109 329 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC007485.1-201ENST00000616755 206 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AL159153.1-201ENST00000619688 317 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.34□□□□□ -2.03
NR1D1P20393 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NR1D1P20393 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.34□□□□□ -2.04
NR1D1P20393 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NR1D1P20393 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NR1D1P20393 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NR1D1P20393 AC233981.2-201ENST00000611524 1614 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 RNU4-9P-201ENST00000364951 139 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 RNU6-968P-201ENST00000384076 107 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 SNORA26.3-201ENST00000391119 136 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 MRPL42P3-201ENST00000401492 326 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC138623.1-201ENST00000418060 216 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AL591806.2-201ENST00000433122 173 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC244670.1-201ENST00000436879 112 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.33□□□□□ -2.04
NR1D1P20393 RNU6-717P-201ENST00000459076 104 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 Y_RNA.661-201ENST00000516003 99 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 RNU6-1137P-201ENST00000517073 99 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
NR1D1P20393 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NR1D1P20393 AL590705.4-201ENST00000532209 134 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 HSPE1P4-201ENST00000550617 308 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.33□□□□□ -2.04
NR1D1P20393 AC007375.1-201ENST00000554513 578 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC021231.3-201ENST00000558497 370 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC104581.2-201ENST00000572227 430 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 MIR4680-201ENST00000580906 66 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC008737.2-201ENST00000599446 118 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC136443.5-201ENST00000603741 370 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AL138963.2-201ENST00000605137 226 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
NR1D1P20393 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
NR1D1P20393 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NR1D1P20393 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
NR1D1P20393 Y_RNA.80-201ENST00000362996 102 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 SNORA3A-201ENST00000364113 130 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 Y_RNA.364-201ENST00000365532 101 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 RNA5SP338-201ENST00000410495 85 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AC113618.1-201ENST00000416747 285 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AC007098.1-201ENST00000420122 367 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AL160004.2-201ENST00000432935 350 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.32□□□□□ -2.04
NR1D1P20393 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 RPL30P12-201ENST00000474666 353 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 RNU7-175P-201ENST00000515915 61 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 RNU6-567P-201ENST00000516746 107 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 RNU7-4P-201ENST00000516961 62 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
NR1D1P20393 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.32□□□□□ -2.04
NR1D1P20393 MIR3136-201ENST00000583498 78 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 AC006157.1-201ENST00000611750 366 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.32□□□□□ -2.04
NR1D1P20393 SCARNA4-201ENST00000629045 128 ntBASIC2.32□□□□□ -2.04
NR1D1P20393 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NR1D1P20393 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NR1D1P20393 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
NR1D1P20393 Y_RNA.48-201ENST00000362710 103 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RNU6-529P-201ENST00000363383 104 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RNA5SP99-201ENST00000364020 114 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 SNORD115-32-201ENST00000364079 82 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 MIR625-201ENST00000385047 85 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RNU6-985P-201ENST00000410182 104 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RNU6-1156P-201ENST00000410365 100 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.31□□□□□ -2.04
NR1D1P20393 MRPS18CP6-201ENST00000423587 223 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.31□□□□□ -2.04
NR1D1P20393 AL353997.1-201ENST00000432936 108 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RPS15AP28-201ENST00000435088 386 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.31□□□□□ -2.04
NR1D1P20393 GPM6BP3-201ENST00000442797 145 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 MTND5P22-201ENST00000458380 195 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 snoU13.30-201ENST00000458951 104 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RPL30P1-201ENST00000488676 339 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RPL23AP75-201ENST00000491601 451 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 RNA5SP458-201ENST00000516188 119 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 Y_RNA.720-201ENST00000517166 92 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 GNAI2P1-201ENST00000541815 315 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
NR1D1P20393 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 SNORA43.4-201ENST00000629559 138 ntBASIC2.31□□□□□ -2.04
NR1D1P20393 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NR1D1P20393 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NR1D1P20393 RNU5B-2P-201ENST00000363036 113 ntBASIC2.3□□□□□ -2.04
NR1D1P20393 RNU4-56P-201ENST00000364700 142 ntBASIC2.3□□□□□ -2.04
NR1D1P20393 RNA5SP138-201ENST00000365098 114 ntBASIC2.3□□□□□ -2.04
NR1D1P20393 Y_RNA.504-201ENST00000384481 104 ntBASIC2.3□□□□□ -2.04
NR1D1P20393 MIR524-201ENST00000385242 87 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms