Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF4P18848 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATF4P18848 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF4P18848 AP006437.1-201ENST00000641440 3685 ntBASIC3.18□□□□□ -1.9
ATF4P18848 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF4P18848 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF4P18848 RNU1-14P-201ENST00000362759 152 ntBASIC3.18□□□□□ -1.9
ATF4P18848 Y_RNA.269-201ENST00000364685 89 ntBASIC3.18□□□□□ -1.9
ATF4P18848 RNU6-1289P-201ENST00000384431 106 ntBASIC3.18□□□□□ -1.9
ATF4P18848 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.18□□□□□ -1.9
ATF4P18848 AL157831.1-201ENST00000426134 473 ntBASIC3.18□□□□□ -1.9
ATF4P18848 RNU7-26P-201ENST00000458980 63 ntBASIC3.18□□□□□ -1.9
ATF4P18848 SNORD65B-201ENST00000459126 73 ntBASIC3.18□□□□□ -1.9
ATF4P18848 MRPL49P2-201ENST00000521066 465 ntBASIC3.18□□□□□ -1.9
ATF4P18848 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.18□□□□□ -1.9
ATF4P18848 CYCSP29-201ENST00000533731 318 ntBASIC3.18□□□□□ -1.9
ATF4P18848 AC026271.5-201ENST00000577873 130 ntBASIC3.18□□□□□ -1.9
ATF4P18848 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.18□□□□□ -1.9
ATF4P18848 MIR8059-201ENST00000620427 81 ntBASIC3.18□□□□□ -1.9
ATF4P18848 AC006435.5-201ENST00000624486 112 ntBASIC3.18□□□□□ -1.9
ATF4P18848 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
ATF4P18848 AL159152.1-201ENST00000635019 2587 ntBASIC3.18□□□□□ -1.9
ATF4P18848 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ATF4P18848 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ATF4P18848 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF4P18848 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
ATF4P18848 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.17□□□□□ -1.9
ATF4P18848 Y_RNA.99-201ENST00000363138 105 ntBASIC3.17□□□□□ -1.9
ATF4P18848 SNORD35B-201ENST00000363660 87 ntBASIC3.17□□□□□ -1.9
ATF4P18848 SNORA20B-201ENST00000384220 132 ntBASIC3.17□□□□□ -1.9
ATF4P18848 RNU6-662P-201ENST00000384253 104 ntBASIC3.17□□□□□ -1.9
ATF4P18848 MIR873-201ENST00000401120 77 ntBASIC3.17□□□□□ -1.9
ATF4P18848 AC010154.1-201ENST00000425857 269 ntBASIC3.17□□□□□ -1.9
ATF4P18848 AL691449.1-201ENST00000426570 421 ntBASIC3.17□□□□□ -1.9
ATF4P18848 RNA5SP519-201ENST00000516480 119 ntBASIC3.17□□□□□ -1.9
ATF4P18848 RPPH1-2P-201ENST00000516688 293 ntBASIC3.17□□□□□ -1.9
ATF4P18848 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
ATF4P18848 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF4P18848 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.17□□□□□ -1.9
ATF4P18848 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
ATF4P18848 AC009779.6-201ENST00000603972 165 ntBASIC3.17□□□□□ -1.9
ATF4P18848 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ATF4P18848 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
ATF4P18848 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ATF4P18848 MAPK10-266ENST00000641066 6555 ntBASIC3.17□□□□□ -1.9
ATF4P18848 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ATF4P18848 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.82-201ENST00000363000 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.92-201ENST00000363043 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.235-201ENST00000364412 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.306-201ENST00000365015 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.312-201ENST00000365089 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.322-201ENST00000365151 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 MIR1193-201ENST00000408109 78 ntBASIC3.16□□□□□ -1.9
ATF4P18848 MIR1253-201ENST00000408273 105 ntBASIC3.16□□□□□ -1.9
ATF4P18848 MIR1251-201ENST00000408552 70 ntBASIC3.16□□□□□ -1.9
ATF4P18848 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.650-201ENST00000459002 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ATF4P18848 RNU6-1146P-201ENST00000516282 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.777-201ENST00000516982 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 AC025884.1-201ENST00000556034 378 ntBASIC3.16□□□□□ -1.9
ATF4P18848 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF4P18848 MIR4643-201ENST00000577473 78 ntBASIC3.16□□□□□ -1.9
ATF4P18848 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.771-201ENST00000598668 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 Y_RNA.789-201ENST00000622480 102 ntBASIC3.16□□□□□ -1.9
ATF4P18848 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ATF4P18848 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ATF4P18848 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.15□□□□□ -1.9
ATF4P18848 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
ATF4P18848 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ATF4P18848 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
ATF4P18848 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
ATF4P18848 MIR383-201ENST00000362257 73 ntBASIC3.15□□□□□ -1.91
ATF4P18848 Y_RNA.122-201ENST00000363331 96 ntBASIC3.15□□□□□ -1.91
ATF4P18848 RNY1-201ENST00000364228 113 ntBASIC3.15□□□□□ -1.91
ATF4P18848 Y_RNA.361-201ENST00000365515 120 ntBASIC3.15□□□□□ -1.91
ATF4P18848 RNU6-855P-201ENST00000410395 104 ntBASIC3.15□□□□□ -1.91
ATF4P18848 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.15□□□□□ -1.91
ATF4P18848 AL121890.1-201ENST00000435457 205 ntBASIC3.15□□□□□ -1.91
ATF4P18848 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATF4P18848 RNA5SP49-201ENST00000516450 115 ntBASIC3.15□□□□□ -1.91
ATF4P18848 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.15□□□□□ -1.91
ATF4P18848 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.15□□□□□ -1.91
ATF4P18848 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.15□□□□□ -1.91
ATF4P18848 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ATF4P18848 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.15□□□□□ -1.91
ATF4P18848 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.15□□□□□ -1.91
ATF4P18848 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF4P18848 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
ATF4P18848 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF4P18848 Y_RNA.117-201ENST00000363294 101 ntBASIC3.14□□□□□ -1.91
ATF4P18848 Y_RNA.200-201ENST00000364018 102 ntBASIC3.14□□□□□ -1.91
ATF4P18848 Y_RNA.217-201ENST00000364214 105 ntBASIC3.14□□□□□ -1.91
ATF4P18848 RNU6-407P-201ENST00000365280 104 ntBASIC3.14□□□□□ -1.91
ATF4P18848 Y_RNA.341-201ENST00000365341 102 ntBASIC3.14□□□□□ -1.91
ATF4P18848 RNU6-907P-201ENST00000390924 102 ntBASIC3.14□□□□□ -1.91
ATF4P18848 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
ATF4P18848 AL355796.1-201ENST00000406706 323 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms