Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Y_RNA.364-201ENST00000365532 101 ntBASIC2.34□□□□□ -2.03
PCNAP12004 Y_RNA.485-201ENST00000384395 102 ntBASIC2.34□□□□□ -2.03
PCNAP12004 MIR10B-201ENST00000385011 110 ntBASIC2.34□□□□□ -2.03
PCNAP12004 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
PCNAP12004 RNU2-48P-201ENST00000410694 191 ntBASIC2.34□□□□□ -2.03
PCNAP12004 PMCHL1-202ENST00000423102 261 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC018865.2-201ENST00000423631 129 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 AC004386.2-201ENST00000441858 148 ntBASIC2.34□□□□□ -2.03
PCNAP12004 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 AP001486.1-201ENST00000463339 476 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC007215.1-201ENST00000464893 276 ntBASIC2.34□□□□□ -2.03
PCNAP12004 ANXA2P1-201ENST00000505539 926 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 RNU6-1098P-201ENST00000516772 96 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.34□□□□□ -2.03
PCNAP12004 SNRPGP18-201ENST00000553000 214 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC020661.2-201ENST00000560114 134 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.34□□□□□ -2.03
PCNAP12004 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.34□□□□□ -2.03
PCNAP12004 AC092447.9-201ENST00000603395 144 ntBASIC2.34□□□□□ -2.03
PCNAP12004 AC006157.1-201ENST00000611750 366 ntBASIC2.34□□□□□ -2.03
PCNAP12004 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.34□□□□□ -2.03
PCNAP12004 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.34□□□□□ -2.04
PCNAP12004 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.33□□□□□ -2.04
PCNAP12004 Y_RNA.112-201ENST00000363250 102 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNU4-76P-201ENST00000364509 141 ntBASIC2.33□□□□□ -2.04
PCNAP12004 Y_RNA.252-201ENST00000364556 101 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNU4-42P-201ENST00000364738 142 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNU6-26P-201ENST00000383985 107 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNY1P14-201ENST00000384426 108 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNU6-159P-201ENST00000391080 106 ntBASIC2.33□□□□□ -2.04
PCNAP12004 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCNAP12004 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
PCNAP12004 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC099799.1-201ENST00000439809 192 ntBASIC2.33□□□□□ -2.04
PCNAP12004 Y_RNA.631-201ENST00000459607 101 ntBASIC2.33□□□□□ -2.04
PCNAP12004 ATP5EP1-201ENST00000510257 156 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.33□□□□□ -2.04
PCNAP12004 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
PCNAP12004 RNU6-667P-201ENST00000517186 102 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC022616.8-201ENST00000533569 253 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC018630.3-201ENST00000542637 96 ntBASIC2.33□□□□□ -2.04
PCNAP12004 SNRPGP17-201ENST00000603780 214 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC005562.2-201ENST00000618264 111 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC091925.1-201ENST00000623204 462 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC138305.3-201ENST00000624988 240 ntBASIC2.33□□□□□ -2.04
PCNAP12004 AC134503.1-201ENST00000633048 54 ntBASIC2.33□□□□□ -2.04
PCNAP12004 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PCNAP12004 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
PCNAP12004 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCNAP12004 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.32□□□□□ -2.04
PCNAP12004 BX322639.1-202ENST00000423987 2213 ntBASIC2.32□□□□□ -2.04
PCNAP12004 SNORD115-8-201ENST00000363856 82 ntBASIC2.32□□□□□ -2.04
PCNAP12004 SNORD115-38-201ENST00000365037 82 ntBASIC2.32□□□□□ -2.04
PCNAP12004 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
PCNAP12004 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
PCNAP12004 MIR561-201ENST00000385216 97 ntBASIC2.32□□□□□ -2.04
PCNAP12004 SNORA69.1-201ENST00000390904 137 ntBASIC2.32□□□□□ -2.04
PCNAP12004 MIR548P-201ENST00000408336 84 ntBASIC2.32□□□□□ -2.04
PCNAP12004 Y_RNA.592-201ENST00000410274 109 ntBASIC2.32□□□□□ -2.04
PCNAP12004 Y_RNA.605-201ENST00000410577 105 ntBASIC2.32□□□□□ -2.04
PCNAP12004 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.32□□□□□ -2.04
PCNAP12004 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AL160004.2-201ENST00000432935 350 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.32□□□□□ -2.04
PCNAP12004 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
PCNAP12004 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.32□□□□□ -2.04
PCNAP12004 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.32□□□□□ -2.04
PCNAP12004 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.32□□□□□ -2.04
PCNAP12004 SNORA25.14-201ENST00000516481 132 ntBASIC2.32□□□□□ -2.04
PCNAP12004 RNU2-44P-201ENST00000516795 194 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AC022868.1-201ENST00000517767 391 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.32□□□□□ -2.04
PCNAP12004 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.32□□□□□ -2.04
PCNAP12004 AC090617.3-201ENST00000573670 475 ntBASIC2.32□□□□□ -2.04
PCNAP12004 MIR5006-201ENST00000583027 110 ntBASIC2.32□□□□□ -2.04
PCNAP12004 MIR3171-201ENST00000584270 74 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AC125232.2-201ENST00000592457 143 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.32□□□□□ -2.04
PCNAP12004 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.32□□□□□ -2.04
PCNAP12004 AL132822.1-201ENST00000617063 513 ntBASIC2.32□□□□□ -2.04
PCNAP12004 AL596028.1-201ENST00000326971 197 ntBASIC2.31□□□□□ -2.04
PCNAP12004 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNA5SP361-201ENST00000362686 118 ntBASIC2.31□□□□□ -2.04
PCNAP12004 Y_RNA.128-201ENST00000363391 112 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU6-727P-201ENST00000363592 107 ntBASIC2.31□□□□□ -2.04
PCNAP12004 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU6-234P-201ENST00000365229 104 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU6-708P-201ENST00000384217 107 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNA5SP213-201ENST00000391031 106 ntBASIC2.31□□□□□ -2.04
PCNAP12004 RNU1-139P-201ENST00000391307 165 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
PCNAP12004 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
PCNAP12004 EIF1P2-201ENST00000428233 350 ntBASIC2.31□□□□□ -2.04
PCNAP12004 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms