Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORA12.1-201ENST00000390873 148 ntBASIC0.58□□□□□ -2.32
TPM1P09493 RNU6-440P-201ENST00000390882 105 ntBASIC0.58□□□□□ -2.32
TPM1P09493 SNORD70.1-201ENST00000391007 85 ntBASIC0.58□□□□□ -2.32
TPM1P09493 RNU6-57P-201ENST00000411348 103 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AL008987.1-201ENST00000415528 237 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AC245047.3-201ENST00000429428 127 ntBASIC0.58□□□□□ -2.32
TPM1P09493 CETN4P-201ENST00000432407 469 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.58□□□□□ -2.32
TPM1P09493 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
TPM1P09493 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.58□□□□□ -2.32
TPM1P09493 AC005840.1-201ENST00000498412 377 ntBASIC0.58□□□□□ -2.32
TPM1P09493 RNU6-947P-201ENST00000516264 106 ntBASIC0.58□□□□□ -2.32
TPM1P09493 SNORD27.1-201ENST00000516319 72 ntBASIC0.58□□□□□ -2.32
TPM1P09493 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
TPM1P09493 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AC109446.2-201ENST00000567872 497 ntBASIC0.58□□□□□ -2.32
TPM1P09493 SEPT14P19-203ENST00000633205 211 ntBASIC0.58□□□□□ -2.32
TPM1P09493 MTND4P9-201ENST00000507819 1346 ntBASIC0.58□□□□□ -2.32
TPM1P09493 AC009541.1-201ENST00000438279 2662 ntBASIC0.57□□□□□ -2.32
TPM1P09493 RNU6-1029P-201ENST00000384109 107 ntBASIC0.57□□□□□ -2.32
TPM1P09493 RNU6-17P-201ENST00000384245 107 ntBASIC0.57□□□□□ -2.32
TPM1P09493 RNU6-18P-201ENST00000384527 107 ntBASIC0.57□□□□□ -2.32
TPM1P09493 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
TPM1P09493 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.57□□□□□ -2.32
TPM1P09493 SNORA16.2-201ENST00000390991 127 ntBASIC0.57□□□□□ -2.32
TPM1P09493 MRPL42P3-201ENST00000401492 326 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.57□□□□□ -2.32
TPM1P09493 CDK8P2-201ENST00000415020 547 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AC016909.1-201ENST00000415916 166 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.57□□□□□ -2.32
TPM1P09493 RNU7-21P-201ENST00000459430 62 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.57□□□□□ -2.32
TPM1P09493 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.57□□□□□ -2.32
TPM1P09493 AP003072.2-201ENST00000527756 676 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AC090049.2-201ENST00000550377 109 ntBASIC0.57□□□□□ -2.32
TPM1P09493 uc_338.11-201ENST00000619132 160 ntBASIC0.57□□□□□ -2.32
TPM1P09493 MIR6767-201ENST00000637302 66 ntBASIC0.57□□□□□ -2.32
TPM1P09493 AC023934.1-201ENST00000574529 2389 ntBASIC0.57□□□□□ -2.32
TPM1P09493 SNORD113-6-201ENST00000363345 75 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RNU5F-7P-201ENST00000363696 115 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RNU6-1305P-201ENST00000364353 104 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RNU6-74P-201ENST00000384235 107 ntBASIC0.56□□□□□ -2.32
TPM1P09493 Y_RNA.595-201ENST00000410403 105 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RPS26P42-201ENST00000413485 326 ntBASIC0.56□□□□□ -2.32
TPM1P09493 MTND3P17-201ENST00000416968 344 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC098592.1-201ENST00000419352 333 ntBASIC0.56□□□□□ -2.32
TPM1P09493 GPR143P-201ENST00000434155 205 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RPL39P39-201ENST00000455840 151 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RNU7-57P-201ENST00000459540 60 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.56□□□□□ -2.32
TPM1P09493 AC069113.1-201ENST00000517763 267 ntBASIC0.56□□□□□ -2.32
TPM1P09493 DEFB108E-201ENST00000524692 240 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC008015.1-201ENST00000555505 465 ntBASIC0.56□□□□□ -2.32
TPM1P09493 MTCO3P23-201ENST00000561363 289 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.56□□□□□ -2.32
TPM1P09493 AL357312.1-201ENST00000603879 298 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC009229.3-201ENST00000608056 282 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AP001596.2-201ENST00000608410 312 ntBASIC0.56□□□□□ -2.32
TPM1P09493 AC007671.2-201ENST00000637344 619 ntBASIC0.56□□□□□ -2.32
TPM1P09493 RNU6-199P-201ENST00000362954 107 ntBASIC0.55□□□□□ -2.32
TPM1P09493 AL451046.2-201ENST00000403074 277 ntBASIC0.55□□□□□ -2.32
TPM1P09493 AL035398.1-201ENST00000430869 322 ntBASIC0.55□□□□□ -2.32
TPM1P09493 FABP5P4-201ENST00000437203 171 ntBASIC0.55□□□□□ -2.32
TPM1P09493 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.55□□□□□ -2.32
TPM1P09493 AL009048.1-201ENST00000450437 298 ntBASIC0.55□□□□□ -2.32
TPM1P09493 RNU7-90P-201ENST00000459216 62 ntBASIC0.55□□□□□ -2.32
TPM1P09493 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.55□□□□□ -2.32
TPM1P09493 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.55□□□□□ -2.32
TPM1P09493 AC004584.2-201ENST00000570407 410 ntBASIC0.55□□□□□ -2.32
TPM1P09493 AL162424.1-201ENST00000602325 221 ntBASIC0.55□□□□□ -2.32
TPM1P09493 BNIP3P10-201ENST00000605360 577 ntBASIC0.55□□□□□ -2.32
TPM1P09493 MIR7844-201ENST00000616161 122 ntBASIC0.55□□□□□ -2.32
TPM1P09493 CASC19-280ENST00000642102 1351 ntBASIC0.55□□□□□ -2.32
TPM1P09493 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TPM1P09493 RNU6-1127P-201ENST00000384580 107 ntBASIC0.54□□□□□ -2.32
TPM1P09493 AL355796.1-201ENST00000406706 323 ntBASIC0.54□□□□□ -2.32
TPM1P09493 AC004866.1-201ENST00000411748 78 ntBASIC0.54□□□□□ -2.32
TPM1P09493 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.54□□□□□ -2.32
TPM1P09493 AC008134.1-201ENST00000420943 193 ntBASIC0.54□□□□□ -2.32
TPM1P09493 AC005002.2-201ENST00000438228 269 ntBASIC0.54□□□□□ -2.32
TPM1P09493 RPEP5-201ENST00000441137 268 ntBASIC0.54□□□□□ -2.32
TPM1P09493 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.54□□□□□ -2.32
TPM1P09493 AC025647.1-201ENST00000517879 253 ntBASIC0.54□□□□□ -2.32
TPM1P09493 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.54□□□□□ -2.32
TPM1P09493 AGGF1P4-201ENST00000568249 801 ntBASIC0.54□□□□□ -2.32
TPM1P09493 MIR3941-201ENST00000582572 103 ntBASIC0.54□□□□□ -2.32
TPM1P09493 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
TPM1P09493 Y_RNA.598-201ENST00000410480 95 ntBASIC0.53□□□□□ -2.32
TPM1P09493 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.53□□□□□ -2.32
TPM1P09493 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.53□□□□□ -2.32
TPM1P09493 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.53□□□□□ -2.32
TPM1P09493 MTCO3P8-201ENST00000453691 755 ntBASIC0.53□□□□□ -2.32
TPM1P09493 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
TPM1P09493 UBE2V1P12-201ENST00000503954 474 ntBASIC0.53□□□□□ -2.32
TPM1P09493 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.53□□□□□ -2.32
TPM1P09493 AC011604.1-201ENST00000545978 196 ntBASIC0.53□□□□□ -2.32
TPM1P09493 MIR4778-201ENST00000577635 80 ntBASIC0.53□□□□□ -2.32
TPM1P09493 AP000907.4-201ENST00000604143 237 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms