Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
CXCL1P09341 MTCYBP36-201ENST00000404146 440 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 RNA5SP504-201ENST00000410676 117 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 AC022868.1-201ENST00000517767 391 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 MIR4778-201ENST00000577635 80 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 MIR4452-201ENST00000583004 71 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 AC131055.1-201ENST00000584626 316 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 AP001836.1-201ENST00000604675 523 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.09□□□□□ -2.4
CXCL1P09341 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.09□□□□□ -2.4
CXCL1P09341 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.4
CXCL1P09341 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.09□□□□□ -2.4
CXCL1P09341 Y_RNA.97-201ENST00000363094 102 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 RNU1-133P-201ENST00000364867 167 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 RNU6-641P-201ENST00000384006 107 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 RNU6-793P-201ENST00000384233 104 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 MIR586-201ENST00000385035 97 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 RNU6-1093P-201ENST00000391194 107 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 MRPS18CP6-201ENST00000423587 223 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.08□□□□□ -2.4
CXCL1P09341 MTCYBP10-201ENST00000424905 650 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.08□□□□□ -2.4
CXCL1P09341 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.08□□□□□ -2.4
CXCL1P09341 MTCO1P19-201ENST00000443487 500 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 LINC01399-202ENST00000458450 244 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AC091874.1-201ENST00000511402 339 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 ZNF519P3-201ENST00000557158 1032 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AL158042.1-201ENST00000605338 460 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AC097065.2-201ENST00000608159 533 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AL136317.1-201ENST00000612653 226 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 TCL6_2.1-201ENST00000615162 119 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 7SK.10-201ENST00000621414 298 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 AL589743.1-201ENST00000551932 2712 ntBASIC0.08□□□□□ -2.4
CXCL1P09341 Y_RNA.22-201ENST00000362492 102 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 Y_RNA.110-201ENST00000363220 99 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 RNA5SP247-201ENST00000411181 105 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 AC016909.1-201ENST00000415916 166 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.07□□□□□ -2.4
CXCL1P09341 MTND3P1-201ENST00000441336 220 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 TAF9P1-201ENST00000445421 515 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 TAF9P2-201ENST00000454958 515 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.07□□□□□ -2.4
CXCL1P09341 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.07□□□□□ -2.4
CXCL1P09341 RNU6-276P-201ENST00000516114 96 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.07□□□□□ -2.4
CXCL1P09341 AC080013.3-201ENST00000606839 578 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 MIR8070-201ENST00000616510 88 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.07□□□□□ -2.4
CXCL1P09341 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.07□□□□□ -2.4
CXCL1P09341 AP000568.1-201ENST00000282964 442 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 RNU6-179P-201ENST00000363350 107 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 RNU2-8P-201ENST00000410727 190 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.06□□□□□ -2.4
CXCL1P09341 AC008134.1-201ENST00000420943 193 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC119618.1-201ENST00000434191 222 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AL162725.1-201ENST00000435405 301 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
CXCL1P09341 AC009237.7-201ENST00000447357 229 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.06□□□□□ -2.4
CXCL1P09341 TPT1P7-201ENST00000458300 517 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 snoU13.25-201ENST00000458945 104 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 RNU7-94P-201ENST00000459576 63 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.06□□□□□ -2.4
CXCL1P09341 AC112204.1-201ENST00000502591 103 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC010587.1-201ENST00000505809 469 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC025465.4-201ENST00000513422 638 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 RNU7-128P-201ENST00000517247 62 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC087854.1-201ENST00000519706 414 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC109810.1-201ENST00000534066 224 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AL137100.2-201ENST00000555786 315 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC011195.1-201ENST00000578177 177 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 MTND3P19-201ENST00000603825 345 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AC091805.2-201ENST00000603848 235 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 SNORA28-201ENST00000606769 126 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 AL096861.1-201ENST00000610899 123 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
CXCL1P09341 AL445984.1-201ENST00000637834 659 ntBASIC0.06□□□□□ -2.4
CXCL1P09341 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CXCL1P09341 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 RNU6-177P-201ENST00000411257 104 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AL445305.1-201ENST00000432577 575 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 RPL37P21-201ENST00000435890 276 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.05□□□□□ -2.4
CXCL1P09341 AC004386.2-201ENST00000441858 148 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC093019.1-201ENST00000443135 252 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 OR9P1P-201ENST00000496431 281 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.05□□□□□ -2.4
CXCL1P09341 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.05□□□□□ -2.4
CXCL1P09341 RNU6-405P-201ENST00000516637 110 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 RNU6-467P-201ENST00000517027 110 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC025647.1-201ENST00000517879 253 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC105185.1-201ENST00000518705 535 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.05□□□□□ -2.4
CXCL1P09341 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.05□□□□□ -2.4
CXCL1P09341 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
CXCL1P09341 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.05□□□□□ -2.4
CXCL1P09341 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.05□□□□□ -2.4
CXCL1P09341 SNORA25.9-201ENST00000365087 128 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms