Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SFTPBP07988 MIR1283-1-201ENST00000408494 87 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 RNU2-2P-201ENST00000410396 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SFTPBP07988 MTCO3P46-201ENST00000425787 232 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
SFTPBP07988 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.67□□□□□ -2.14
SFTPBP07988 RNU6-718P-201ENST00000516166 105 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 Y_RNA.676-201ENST00000516393 96 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 SUB1P4-201ENST00000566062 339 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.67□□□□□ -2.14
SFTPBP07988 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.67□□□□□ -2.14
SFTPBP07988 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.67□□□□□ -2.14
SFTPBP07988 AC019193.3-201ENST00000609144 554 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 AC009318.2-201ENST00000610917 651 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.15-201ENST00000611544 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 RMST_6.1-201ENST00000611980 203 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.16-201ENST00000613119 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.12-201ENST00000613778 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.20-201ENST00000613956 192 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.9-201ENST00000615427 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.11-201ENST00000616345 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.2-201ENST00000616535 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.3-201ENST00000617785 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.19-201ENST00000618602 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 RNU2-1-201ENST00000618664 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.6-201ENST00000619225 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.5-201ENST00000619465 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 U2.10-201ENST00000620268 191 ntBASIC1.67□□□□□ -2.14
SFTPBP07988 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.67□□□□□ -2.14
SFTPBP07988 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
SFTPBP07988 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.67□□□□□ -2.14
SFTPBP07988 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
SFTPBP07988 RNU6-831P-201ENST00000384548 107 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 NCOR1P3-201ENST00000420479 303 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 Z82188.1-201ENST00000436709 154 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 DAP3P1-201ENST00000441522 278 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.66□□□□□ -2.14
SFTPBP07988 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.66□□□□□ -2.14
SFTPBP07988 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.66□□□□□ -2.14
SFTPBP07988 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.66□□□□□ -2.14
SFTPBP07988 MIR4753-201ENST00000585119 83 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 AC090517.2-201ENST00000614966 680 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 SCARNA4-201ENST00000629045 128 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 MTND5P9-201ENST00000503854 1755 ntBASIC1.66□□□□□ -2.14
SFTPBP07988 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SFTPBP07988 ZNF204P-201ENST00000416749 2397 ntBASIC1.65□□□□□ -2.14
SFTPBP07988 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SFTPBP07988 AL356292.1-201ENST00000283110 373 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 U8.10-201ENST00000384260 133 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 MIR300-201ENST00000401138 83 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AC009161.1-201ENST00000417306 376 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RPL21P111-201ENST00000418453 477 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.65□□□□□ -2.15
SFTPBP07988 AC016717.1-201ENST00000448918 286 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 ATP5J2P3-201ENST00000451550 258 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.65□□□□□ -2.15
SFTPBP07988 AC007215.1-201ENST00000464893 276 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RPS29P25-201ENST00000481709 171 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 RNU6-1041P-201ENST00000516254 102 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.65□□□□□ -2.15
SFTPBP07988 RRN3P3-201ENST00000549207 578 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.65□□□□□ -2.15
SFTPBP07988 AC010928.2-201ENST00000588017 287 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AC124303.1-201ENST00000605703 360 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.65□□□□□ -2.15
SFTPBP07988 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.65□□□□□ -2.15
SFTPBP07988 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SFTPBP07988 RNU6-862P-201ENST00000362804 105 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 Y_RNA.140-201ENST00000363474 103 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SFTPBP07988 MIR32-201ENST00000384965 70 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 UBE2V1P8-201ENST00000437166 265 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
SFTPBP07988 AL357134.1-201ENST00000445848 426 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 AC009237.7-201ENST00000447357 229 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 FO393415.2-201ENST00000480085 343 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 ACA59.1-201ENST00000515966 143 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 RNU6-864P-201ENST00000516256 108 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 RNU6-1088P-201ENST00000516850 104 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 RNU6-856P-201ENST00000516959 98 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.64□□□□□ -2.15
SFTPBP07988 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.64□□□□□ -2.15
SFTPBP07988 AC137590.2-201ENST00000619709 240 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 AC006504.8-201ENST00000621046 635 ntBASIC1.64□□□□□ -2.15
SFTPBP07988 MTND4P5-201ENST00000435821 1374 ntBASIC1.63□□□□□ -2.15
SFTPBP07988 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SFTPBP07988 RNU6-112P-201ENST00000363599 104 ntBASIC1.63□□□□□ -2.15
SFTPBP07988 Y_RNA.157-201ENST00000363638 102 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 282 ms