Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RNY3P9-201ENST00000384727 106 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 MTND3P9-201ENST00000429526 346 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 AC098826.2-201ENST00000452011 651 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 RPL26P26-201ENST00000480251 434 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 AC025465.4-201ENST00000513422 638 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 RNU6-1041P-201ENST00000516254 102 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 RNU2-34P-201ENST00000516534 121 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.36□□□□□ -2.19
CAPN1P07384 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.36□□□□□ -2.19
CAPN1P07384 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.36□□□□□ -2.19
CAPN1P07384 MIR5692C1-201ENST00000585309 91 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.36□□□□□ -2.19
CAPN1P07384 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CAPN1P07384 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
CAPN1P07384 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.35□□□□□ -2.19
CAPN1P07384 MTND5P26-201ENST00000426018 1752 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 Y_RNA.167-201ENST00000363735 109 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-82P-201ENST00000363970 107 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 Y_RNA.226-201ENST00000364337 114 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-392P-201ENST00000364926 101 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU4-66P-201ENST00000365199 138 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-1329P-201ENST00000365664 107 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 SNORA69-201ENST00000383895 132 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CAPN1P07384 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-835P-201ENST00000516974 104 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-902P-201ENST00000517212 91 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 AC087854.1-201ENST00000519706 414 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 AC026470.2-201ENST00000561492 181 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 SNORA59B-202ENST00000578183 701 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 AL357078.3-201ENST00000607528 618 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 AC092807.2-201ENST00000609367 243 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 MIR8070-201ENST00000616510 88 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 AC097520.1-201ENST00000624435 385 ntBASIC1.35□□□□□ -2.19
CAPN1P07384 RNU6-545P-201ENST00000362681 104 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 RNU6-1317P-201ENST00000364582 104 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 MIR320B2-201ENST00000408479 138 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 RNA5SP494-201ENST00000410653 129 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.34□□□□□ -2.19
CAPN1P07384 COX6CP10-201ENST00000416832 224 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.34□□□□□ -2.19
CAPN1P07384 TIMM9P3-201ENST00000428659 274 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AC099677.2-201ENST00000436385 175 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.34□□□□□ -2.19
CAPN1P07384 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.34□□□□□ -2.19
CAPN1P07384 RNU6-261P-201ENST00000459506 102 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 RPS26P55-201ENST00000471178 356 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 RNU6-948P-201ENST00000516374 107 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.34□□□□□ -2.19
CAPN1P07384 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 MIR5006-201ENST00000583027 110 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AC005562.2-201ENST00000618264 111 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 MIR6863-201ENST00000636112 90 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
CAPN1P07384 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-1322P-201ENST00000364309 107 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 SNORD1A-201ENST00000364968 72 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-418P-201ENST00000384035 107 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 SNORA29-201ENST00000384183 140 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 SNORD116-1-201ENST00000384335 95 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
CAPN1P07384 MIR1283-1-201ENST00000408494 87 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-648P-201ENST00000410190 107 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU2-66P-201ENST00000410650 161 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 C8orf59P1-201ENST00000429930 303 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 USP9YP14-201ENST00000430663 563 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.33□□□□□ -2.2
CAPN1P07384 SRRM1P2-201ENST00000464531 1192 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 Y_RNA.654-201ENST00000497848 106 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 AC091435.1-201ENST00000505442 584 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 SNORA19.2-201ENST00000516013 114 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-1146P-201ENST00000516282 102 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 RNU6-405P-201ENST00000516637 110 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 AC084364.2-201ENST00000546924 395 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.33□□□□□ -2.2
CAPN1P07384 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.33□□□□□ -2.2
CAPN1P07384 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 CTHRC1P1-201ENST00000605383 469 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 MIR3976-201ENST00000606807 139 ntBASIC1.33□□□□□ -2.2
CAPN1P07384 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CAPN1P07384 RNU5B-2P-201ENST00000363036 113 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 SNORA72.2-201ENST00000365028 127 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 MIR514A2-201ENST00000385131 88 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 MIR514A3-201ENST00000385132 88 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AL135790.2-201ENST00000437701 267 ntBASIC1.32□□□□□ -2.2
CAPN1P07384 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.32□□□□□ -2.2
CAPN1P07384 MTND3P16-201ENST00000452205 344 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms