Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MIR337-201ENST00000362281 93 ntBASIC0.35□□□□□ -2.35
TPM3P06753 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.35□□□□□ -2.35
TPM3P06753 SNORA16.2-201ENST00000390991 127 ntBASIC0.35□□□□□ -2.35
TPM3P06753 SNORD99-201ENST00000408612 74 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM3P06753 AC016909.1-201ENST00000415916 166 ntBASIC0.35□□□□□ -2.35
TPM3P06753 MTND3P17-201ENST00000416968 344 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.35□□□□□ -2.35
TPM3P06753 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.35□□□□□ -2.35
TPM3P06753 AC004386.2-201ENST00000441858 148 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM3P06753 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM3P06753 AC074290.1-201ENST00000448883 135 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM3P06753 MTCO2P6-201ENST00000463134 685 ntBASIC0.35□□□□□ -2.35
TPM3P06753 RNU6-917P-201ENST00000516294 104 ntBASIC0.35□□□□□ -2.35
TPM3P06753 SCARNA24.1-201ENST00000516465 137 ntBASIC0.35□□□□□ -2.35
TPM3P06753 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.35□□□□□ -2.35
TPM3P06753 MTATP6P3-201ENST00000581686 676 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AC025627.3-201ENST00000582078 182 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AL162424.1-201ENST00000602325 221 ntBASIC0.35□□□□□ -2.35
TPM3P06753 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AC136443.5-201ENST00000603741 370 ntBASIC0.35□□□□□ -2.35
TPM3P06753 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.35□□□□□ -2.35
TPM3P06753 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM3P06753 AC005002.2-201ENST00000438228 269 ntBASIC0.34□□□□□ -2.36
TPM3P06753 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM3P06753 AC022364.2-201ENST00000457963 554 ntBASIC0.34□□□□□ -2.36
TPM3P06753 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM3P06753 AC025465.4-201ENST00000513422 638 ntBASIC0.34□□□□□ -2.36
TPM3P06753 RNU6-1220P-201ENST00000517126 108 ntBASIC0.34□□□□□ -2.36
TPM3P06753 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM3P06753 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.34□□□□□ -2.36
TPM3P06753 AC004584.2-201ENST00000570407 410 ntBASIC0.34□□□□□ -2.36
TPM3P06753 AC011155.2-201ENST00000623202 216 ntBASIC0.34□□□□□ -2.36
TPM3P06753 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.34□□□□□ -2.36
TPM3P06753 AL078595.3-201ENST00000623815 1166 ntBASIC0.34□□□□□ -2.36
TPM3P06753 Y_RNA.480-201ENST00000384364 102 ntBASIC0.33□□□□□ -2.36
TPM3P06753 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TPM3P06753 RNU6-57P-201ENST00000411348 103 ntBASIC0.33□□□□□ -2.36
TPM3P06753 MTCO2P23-201ENST00000425216 680 ntBASIC0.33□□□□□ -2.36
TPM3P06753 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.33□□□□□ -2.36
TPM3P06753 AC245047.8-201ENST00000456455 284 ntBASIC0.33□□□□□ -2.36
TPM3P06753 snoU13.6-201ENST00000458785 104 ntBASIC0.33□□□□□ -2.36
TPM3P06753 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
TPM3P06753 RNU6-1053P-201ENST00000515930 101 ntBASIC0.33□□□□□ -2.36
TPM3P06753 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
TPM3P06753 AC138749.5-201ENST00000611461 208 ntBASIC0.33□□□□□ -2.36
TPM3P06753 RNU6-1287P-201ENST00000362914 107 ntBASIC0.32□□□□□ -2.36
TPM3P06753 RNY1P12-201ENST00000364251 105 ntBASIC0.32□□□□□ -2.36
TPM3P06753 RNU6-163P-201ENST00000384396 106 ntBASIC0.32□□□□□ -2.36
TPM3P06753 RNU6-1060P-201ENST00000384664 107 ntBASIC0.32□□□□□ -2.36
TPM3P06753 MIR586-201ENST00000385035 97 ntBASIC0.32□□□□□ -2.36
TPM3P06753 CDK8P2-201ENST00000415020 547 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AC098934.3-201ENST00000430450 190 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AC009237.7-201ENST00000447357 229 ntBASIC0.32□□□□□ -2.36
TPM3P06753 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
TPM3P06753 FABP5P5-201ENST00000515537 406 ntBASIC0.32□□□□□ -2.36
TPM3P06753 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
TPM3P06753 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AP002001.1-203ENST00000534002 267 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.32□□□□□ -2.36
TPM3P06753 AC009159.2-201ENST00000617603 606 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AC022418.1-201ENST00000624118 445 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AC004808.1-201ENST00000627671 721 ntBASIC0.32□□□□□ -2.36
TPM3P06753 U6.114-201ENST00000636407 96 ntBASIC0.32□□□□□ -2.36
TPM3P06753 AL442644.1-201ENST00000454390 3105 ntBASIC0.32□□□□□ -2.36
TPM3P06753 Y_RNA.338-201ENST00000365320 114 ntBASIC0.31□□□□□ -2.36
TPM3P06753 SNORA2.2-201ENST00000365473 135 ntBASIC0.31□□□□□ -2.36
TPM3P06753 MTCO2P12-201ENST00000427426 682 ntBASIC0.31□□□□□ -2.36
TPM3P06753 AL031313.1-201ENST00000448435 256 ntBASIC0.31□□□□□ -2.36
TPM3P06753 RNU7-57P-201ENST00000459540 60 ntBASIC0.31□□□□□ -2.36
TPM3P06753 RNU6-467P-201ENST00000517027 110 ntBASIC0.31□□□□□ -2.36
TPM3P06753 SNORA25.17-201ENST00000517184 124 ntBASIC0.31□□□□□ -2.36
TPM3P06753 AC016256.1-201ENST00000547971 354 ntBASIC0.31□□□□□ -2.36
TPM3P06753 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.31□□□□□ -2.36
TPM3P06753 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.31□□□□□ -2.36
TPM3P06753 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.31□□□□□ -2.36
TPM3P06753 AP000568.1-201ENST00000282964 442 ntBASIC0.3□□□□□ -2.36
TPM3P06753 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM3P06753 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM3P06753 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM3P06753 AC025647.1-201ENST00000517879 253 ntBASIC0.3□□□□□ -2.36
TPM3P06753 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.3□□□□□ -2.36
TPM3P06753 AC027419.1-201ENST00000522976 328 ntBASIC0.3□□□□□ -2.36
TPM3P06753 SUB1P2-201ENST00000556401 297 ntBASIC0.3□□□□□ -2.36
TPM3P06753 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.3□□□□□ -2.36
TPM3P06753 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.3□□□□□ -2.36
TPM3P06753 AC093913.1-201ENST00000614178 329 ntBASIC0.3□□□□□ -2.36
TPM3P06753 RNU5F-6P-201ENST00000362979 116 ntBASIC0.29□□□□□ -2.36
TPM3P06753 RNU6-1305P-201ENST00000364353 104 ntBASIC0.29□□□□□ -2.36
TPM3P06753 SNORA20.2-201ENST00000383922 131 ntBASIC0.29□□□□□ -2.36
TPM3P06753 RNU6-83P-201ENST00000384568 112 ntBASIC0.29□□□□□ -2.36
TPM3P06753 SNORD89-201ENST00000390981 114 ntBASIC0.29□□□□□ -2.36
TPM3P06753 AC004866.1-201ENST00000411748 78 ntBASIC0.29□□□□□ -2.36
TPM3P06753 AC008134.1-201ENST00000420943 193 ntBASIC0.29□□□□□ -2.36
TPM3P06753 ISCA1P6-201ENST00000427740 390 ntBASIC0.29□□□□□ -2.36
TPM3P06753 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.29□□□□□ -2.36
TPM3P06753 RNU7-128P-201ENST00000517247 62 ntBASIC0.29□□□□□ -2.36
TPM3P06753 AC106038.2-201ENST00000520706 568 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 243.4 ms