Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 HMGB1P29-201ENST00000505659 499 ntBASIC0.47□□□□□ -2.33
APOEP02649 RNU6-1146P-201ENST00000516282 102 ntBASIC0.47□□□□□ -2.33
APOEP02649 RNA5SP121-201ENST00000516537 101 ntBASIC0.47□□□□□ -2.33
APOEP02649 AC091805.2-201ENST00000603848 235 ntBASIC0.47□□□□□ -2.33
APOEP02649 AP001836.1-201ENST00000604675 523 ntBASIC0.47□□□□□ -2.33
APOEP02649 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.47□□□□□ -2.33
APOEP02649 AC107308.1-201ENST00000615897 301 ntBASIC0.47□□□□□ -2.33
APOEP02649 AC009159.2-201ENST00000617603 606 ntBASIC0.47□□□□□ -2.33
APOEP02649 MIR8054-201ENST00000620877 86 ntBASIC0.47□□□□□ -2.33
APOEP02649 U6.108-201ENST00000637764 58 ntBASIC0.47□□□□□ -2.33
APOEP02649 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
APOEP02649 RNU6-1335P-201ENST00000365426 107 ntBASIC0.46□□□□□ -2.34
APOEP02649 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
APOEP02649 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.46□□□□□ -2.34
APOEP02649 AL031313.1-201ENST00000448435 256 ntBASIC0.46□□□□□ -2.34
APOEP02649 snoU13.6-201ENST00000458785 104 ntBASIC0.46□□□□□ -2.34
APOEP02649 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.46□□□□□ -2.34
APOEP02649 AC091951.3-201ENST00000504093 246 ntBASIC0.46□□□□□ -2.34
APOEP02649 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.46□□□□□ -2.34
APOEP02649 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.46□□□□□ -2.34
APOEP02649 APOOP3-201ENST00000536787 586 ntBASIC0.46□□□□□ -2.34
APOEP02649 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.46□□□□□ -2.34
APOEP02649 AL136221.1-201ENST00000621449 509 ntBASIC0.46□□□□□ -2.34
APOEP02649 ELL2P3-201ENST00000457883 1602 ntBASIC0.46□□□□□ -2.34
APOEP02649 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
APOEP02649 RNU5F-6P-201ENST00000362979 116 ntBASIC0.45□□□□□ -2.34
APOEP02649 RNU4-76P-201ENST00000364509 141 ntBASIC0.45□□□□□ -2.34
APOEP02649 RNU6-1200P-201ENST00000384162 107 ntBASIC0.45□□□□□ -2.34
APOEP02649 MIR1253-201ENST00000408273 105 ntBASIC0.45□□□□□ -2.34
APOEP02649 RN7SKP200-201ENST00000410564 320 ntBASIC0.45□□□□□ -2.34
APOEP02649 AC005002.2-201ENST00000438228 269 ntBASIC0.45□□□□□ -2.34
APOEP02649 SRRM1P2-201ENST00000464531 1192 ntBASIC0.45□□□□□ -2.34
APOEP02649 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 RNU6-496P-201ENST00000516145 99 ntBASIC0.45□□□□□ -2.34
APOEP02649 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.45□□□□□ -2.34
APOEP02649 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 MIR4778-201ENST00000577635 80 ntBASIC0.45□□□□□ -2.34
APOEP02649 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.45□□□□□ -2.34
APOEP02649 RNU4-5P-201ENST00000607255 135 ntBASIC0.45□□□□□ -2.34
APOEP02649 AC097065.2-201ENST00000608159 533 ntBASIC0.45□□□□□ -2.34
APOEP02649 AC011155.2-201ENST00000623202 216 ntBASIC0.45□□□□□ -2.34
APOEP02649 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.45□□□□□ -2.34
APOEP02649 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.45□□□□□ -2.34
APOEP02649 RNU6-1287P-201ENST00000362914 107 ntBASIC0.44□□□□□ -2.34
APOEP02649 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
APOEP02649 RNU6-1060P-201ENST00000384664 107 ntBASIC0.44□□□□□ -2.34
APOEP02649 SNORA40.4-201ENST00000390971 128 ntBASIC0.44□□□□□ -2.34
APOEP02649 RPEP5-201ENST00000441137 268 ntBASIC0.44□□□□□ -2.34
APOEP02649 AL162395.1-201ENST00000457882 422 ntBASIC0.44□□□□□ -2.34
APOEP02649 RNU7-21P-201ENST00000459430 62 ntBASIC0.44□□□□□ -2.34
APOEP02649 MTCO2P6-201ENST00000463134 685 ntBASIC0.44□□□□□ -2.34
APOEP02649 AC025465.4-201ENST00000513422 638 ntBASIC0.44□□□□□ -2.34
APOEP02649 MIR4711-201ENST00000578274 70 ntBASIC0.44□□□□□ -2.34
APOEP02649 AP001596.2-201ENST00000608410 312 ntBASIC0.44□□□□□ -2.34
APOEP02649 AC005562.2-201ENST00000618264 111 ntBASIC0.44□□□□□ -2.34
APOEP02649 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.44□□□□□ -2.34
APOEP02649 SNORA20.2-201ENST00000383922 131 ntBASIC0.43□□□□□ -2.34
APOEP02649 MIR489-201ENST00000384923 84 ntBASIC0.43□□□□□ -2.34
APOEP02649 RNU6-440P-201ENST00000390882 105 ntBASIC0.43□□□□□ -2.34
APOEP02649 AL596276.1-201ENST00000434465 418 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC004386.2-201ENST00000441858 148 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC079382.1-201ENST00000493346 557 ntBASIC0.43□□□□□ -2.34
APOEP02649 RNU1-142P-201ENST00000516682 145 ntBASIC0.43□□□□□ -2.34
APOEP02649 MIR5006-201ENST00000583027 110 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC005771.1-201ENST00000585581 349 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC146944.4-201ENST00000602697 718 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC018714.1-201ENST00000605028 208 ntBASIC0.43□□□□□ -2.34
APOEP02649 AL513423.1-201ENST00000621695 132 ntBASIC0.43□□□□□ -2.34
APOEP02649 AC138649.3-201ENST00000622154 254 ntBASIC0.43□□□□□ -2.34
APOEP02649 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.43□□□□□ -2.34
APOEP02649 U6.114-201ENST00000636407 96 ntBASIC0.43□□□□□ -2.34
APOEP02649 RNY1P12-201ENST00000364251 105 ntBASIC0.42□□□□□ -2.34
APOEP02649 RNU6-169P-201ENST00000365336 107 ntBASIC0.42□□□□□ -2.34
APOEP02649 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
APOEP02649 SNORA75.2-201ENST00000391138 150 ntBASIC0.42□□□□□ -2.34
APOEP02649 SNORA75.3-201ENST00000391231 150 ntBASIC0.42□□□□□ -2.34
APOEP02649 AC016909.1-201ENST00000415916 166 ntBASIC0.42□□□□□ -2.34
APOEP02649 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.42□□□□□ -2.34
APOEP02649 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.42□□□□□ -2.34
APOEP02649 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.42□□□□□ -2.34
APOEP02649 AC098869.1-201ENST00000481627 292 ntBASIC0.42□□□□□ -2.34
APOEP02649 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.42□□□□□ -2.34
APOEP02649 AL391840.1-201ENST00000571144 367 ntBASIC0.42□□□□□ -2.34
APOEP02649 AC138749.5-201ENST00000611461 208 ntBASIC0.42□□□□□ -2.34
APOEP02649 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
APOEP02649 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.42□□□□□ -2.34
APOEP02649 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
APOEP02649 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
APOEP02649 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
APOEP02649 MIR660-201ENST00000385235 97 ntBASIC0.41□□□□□ -2.34
APOEP02649 MIR653-201ENST00000385279 96 ntBASIC0.41□□□□□ -2.34
APOEP02649 RNU6-57P-201ENST00000411348 103 ntBASIC0.41□□□□□ -2.34
APOEP02649 AC004866.1-201ENST00000411748 78 ntBASIC0.41□□□□□ -2.34
APOEP02649 MTCO2P23-201ENST00000425216 680 ntBASIC0.41□□□□□ -2.34
APOEP02649 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.41□□□□□ -2.34
APOEP02649 AC245047.3-201ENST00000429428 127 ntBASIC0.41□□□□□ -2.34
APOEP02649 AL365184.2-201ENST00000431139 435 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms