Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP005639.2-201ENST00000527592 928 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.89□□□□□ -2.11
PDGFBP01127 MIR4790-201ENST00000577799 79 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 AP003465.2-201ENST00000602571 373 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 RMST_6.1-201ENST00000611980 203 ntBASIC1.89□□□□□ -2.11
PDGFBP01127 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.89□□□□□ -2.11
PDGFBP01127 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PDGFBP01127 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 RNU6-128P-201ENST00000383976 107 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 RNU6-142P-201ENST00000384019 107 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 RNU6-1093P-201ENST00000391194 107 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
PDGFBP01127 RNA5SP118-201ENST00000410385 109 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 EIF1AXP1-201ENST00000419267 435 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFBP01127 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFBP01127 RPS29P27-201ENST00000463711 170 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 FO393415.2-201ENST00000480085 343 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 AC093259.1-201ENST00000509755 300 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFBP01127 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
PDGFBP01127 RNU6-358P-201ENST00000516564 75 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.88□□□□□ -2.11
PDGFBP01127 MIR3923-201ENST00000579521 83 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 AC100830.2-201ENST00000581636 240 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 POLR3GP2-201ENST00000588366 668 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 Z98751.3-201ENST00000604447 521 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 SNORA43.4-201ENST00000629559 138 ntBASIC1.88□□□□□ -2.11
PDGFBP01127 Y_RNA.48-201ENST00000362710 103 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-1059P-201ENST00000363752 98 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-1164P-201ENST00000364428 107 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-1013P-201ENST00000384180 107 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-160P-201ENST00000384591 107 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 AC004965.1-201ENST00000413033 213 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.87□□□□□ -2.11
PDGFBP01127 AC078809.1-201ENST00000427601 140 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-864P-201ENST00000516256 108 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 RNU6-566P-201ENST00000516790 107 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.87□□□□□ -2.11
PDGFBP01127 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.87□□□□□ -2.11
PDGFBP01127 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 AC060780.3-201ENST00000589464 80 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
PDGFBP01127 MIR1248-201ENST00000629190 106 ntBASIC1.87□□□□□ -2.11
PDGFBP01127 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PDGFBP01127 AL391987.6-201ENST00000305671 199 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 RNU6-968P-201ENST00000384076 107 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
PDGFBP01127 RNA5SP494-201ENST00000410653 129 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
PDGFBP01127 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.86□□□□□ -2.11
PDGFBP01127 AL133396.1-201ENST00000432048 687 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AL445305.1-201ENST00000432577 575 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.86□□□□□ -2.11
PDGFBP01127 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.86□□□□□ -2.11
PDGFBP01127 RNA5SP454-201ENST00000517231 127 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AP005660.1-201ENST00000522972 293 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.86□□□□□ -2.11
PDGFBP01127 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
PDGFBP01127 MIR4742-201ENST00000581069 85 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AL512598.1-201ENST00000610158 273 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 uc_338.5-201ENST00000611839 155 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 RMST_2.1-201ENST00000617263 136 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 AL450472.1-202ENST00000637286 180 ntBASIC1.86□□□□□ -2.11
PDGFBP01127 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PDGFBP01127 AC092268.1-201ENST00000342691 405 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 RNA5SP325-201ENST00000363756 130 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 SNORA29-201ENST00000384183 140 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 MIR487A-201ENST00000385009 80 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 MIR548F5-201ENST00000408421 86 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 RN7SKP61-201ENST00000410642 295 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC012306.1-201ENST00000423267 114 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 RPL23AP95-201ENST00000426806 265 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.85□□□□□ -2.11
PDGFBP01127 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.85□□□□□ -2.11
PDGFBP01127 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.85□□□□□ -2.11
PDGFBP01127 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC104435.1-201ENST00000483483 166 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC114801.2-201ENST00000503825 781 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 RNU7-30P-201ENST00000516835 62 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.85□□□□□ -2.11
PDGFBP01127 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.85□□□□□ -2.11
PDGFBP01127 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.85□□□□□ -2.11
PDGFBP01127 AC005668.1-201ENST00000571142 476 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC124303.1-201ENST00000605703 360 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 MIR8076-201ENST00000611401 83 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AC130454.1-201ENST00000622948 401 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 AP000553.5-201ENST00000641933 54 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
PDGFBP01127 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms