Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR5007-201ENST00000583098 95 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 AC008739.2-201ENST00000597006 317 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 RPS29P30-201ENST00000600975 111 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.51□□□□□ -1.85
RAPGEF3O95398 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.51□□□□□ -1.85
RAPGEF3O95398 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.51□□□□□ -1.85
RAPGEF3O95398 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 SNORA36A-201ENST00000384221 132 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 U8.10-201ENST00000384260 133 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 Y_RNA.551-201ENST00000384661 102 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 MIR186-201ENST00000384988 86 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 RNU1-139P-201ENST00000391307 165 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC097463.2-201ENST00000421074 142 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AIMP1P2-201ENST00000425294 312 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 USP9YP16-201ENST00000430287 407 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC009969.1-201ENST00000438726 172 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 USP9YP23-201ENST00000455085 407 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC112771.1-201ENST00000463581 102 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 SNORA31.16-201ENST00000516773 139 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AL442163.3-201ENST00000554110 156 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 CYP4A27P-201ENST00000567218 190 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.5□□□□□ -1.85
RAPGEF3O95398 PRR13P7-201ENST00000605538 430 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AL021879.1-201ENST00000611756 288 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC005520.5-201ENST00000613926 164 ntBASIC3.5□□□□□ -1.85
RAPGEF3O95398 AC138915.1-201ENST00000565427 1685 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAPGEF3O95398 Y_RNA.27-201ENST00000362540 103 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RNU6-655P-201ENST00000362858 107 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 Y_RNA.153-201ENST00000363615 91 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RNU6-1210P-201ENST00000363775 107 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 Y_RNA.319-201ENST00000365138 92 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 DYNLT3P1-201ENST00000378574 347 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 SNORD21-201ENST00000383953 95 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RNU6-541P-201ENST00000384709 110 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL21P75-201ENST00000396599 483 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL21P28-201ENST00000401418 483 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AL590556.1-201ENST00000423231 483 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RAPGEF3O95398 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL23AP58-201ENST00000440453 469 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 U8.20-201ENST00000459445 131 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL21P39-201ENST00000463605 483 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL31P41-201ENST00000477967 372 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AC087190.1-201ENST00000484462 480 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AC107032.1-201ENST00000485945 480 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AC093591.1-201ENST00000491435 481 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RPL21P16-201ENST00000495531 483 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 MRPS36P2-201ENST00000512569 299 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RNA5SP112-201ENST00000515937 99 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 SNORA31.6-201ENST00000516241 130 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 RNA5SP54-201ENST00000516951 92 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 Y_RNA.715-201ENST00000517082 110 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 MIR3923-201ENST00000579521 83 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 MIR4765-201ENST00000585007 77 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AL078605.1-201ENST00000603529 500 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AL034555.1-201ENST00000604816 211 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 MIR6845-201ENST00000613182 61 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 AC002064.3-201ENST00000623448 346 ntBASIC3.49□□□□□ -1.85
RAPGEF3O95398 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.49□□□□□ -1.85
RAPGEF3O95398 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RAPGEF3O95398 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 RNU6-1309P-201ENST00000363305 108 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 Y_RNA.557-201ENST00000384680 107 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 HMGB3P2-201ENST00000411913 584 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 AL121594.1-201ENST00000475906 575 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 RNU6-1114P-201ENST00000516022 107 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.48□□□□□ -1.85
RAPGEF3O95398 AL390123.1-201ENST00000603216 237 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 MIR219B-201ENST00000637023 88 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 Z75746.1-201ENST00000440243 2080 ntBASIC3.48□□□□□ -1.85
RAPGEF3O95398 AC008264.2-201ENST00000610193 3731 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 RNU6-450P-201ENST00000364654 107 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 RNY3P4-201ENST00000384428 101 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 SNORA51.11-201ENST00000384442 131 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 SNORA17.3-201ENST00000391159 129 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 CBX3P9-201ENST00000402326 552 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 AC108667.1-201ENST00000428618 249 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.47□□□□□ -1.85
RAPGEF3O95398 RPL36AP21-201ENST00000490372 323 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.47□□□□□ -1.85
RAPGEF3O95398 AC027288.2-201ENST00000553028 243 ntBASIC3.47□□□□□ -1.85
RAPGEF3O95398 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RAPGEF3O95398 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
RAPGEF3O95398 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RAPGEF3O95398 RNU1-76P-201ENST00000362903 159 ntBASIC3.46□□□□□ -1.86
RAPGEF3O95398 RNU6-486P-201ENST00000363116 107 ntBASIC3.46□□□□□ -1.86
RAPGEF3O95398 Y_RNA.144-201ENST00000363521 113 ntBASIC3.46□□□□□ -1.86
RAPGEF3O95398 Y_RNA.149-201ENST00000363558 117 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms