Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR5006-201ENST00000583027 110 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AC011494.1-201ENST00000596454 237 ntBASIC2.27□□□□□ -2.05
RTN3O95197 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.27□□□□□ -2.05
RTN3O95197 uc_338.20-201ENST00000621563 178 ntBASIC2.27□□□□□ -2.05
RTN3O95197 BX322639.1-202ENST00000423987 2213 ntBASIC2.27□□□□□ -2.05
RTN3O95197 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RTN3O95197 AC008555.8-201ENST00000623602 2168 ntBASIC2.26□□□□□ -2.05
RTN3O95197 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RTN3O95197 RNU6-23P-201ENST00000363283 107 ntBASIC2.26□□□□□ -2.05
RTN3O95197 SNORD115-8-201ENST00000363856 82 ntBASIC2.26□□□□□ -2.05
RTN3O95197 Y_RNA.184-201ENST00000363884 108 ntBASIC2.26□□□□□ -2.05
RTN3O95197 SNORD115-38-201ENST00000365037 82 ntBASIC2.26□□□□□ -2.05
RTN3O95197 RNA5SP138-201ENST00000365098 114 ntBASIC2.26□□□□□ -2.05
RTN3O95197 Y_RNA.482-201ENST00000384377 111 ntBASIC2.26□□□□□ -2.05
RTN3O95197 RNU6-601P-201ENST00000384540 107 ntBASIC2.26□□□□□ -2.05
RTN3O95197 Y_RNA.533-201ENST00000384596 114 ntBASIC2.26□□□□□ -2.05
RTN3O95197 RNU11-3P-201ENST00000391111 133 ntBASIC2.26□□□□□ -2.05
RTN3O95197 MIR300-201ENST00000401138 83 ntBASIC2.26□□□□□ -2.05
RTN3O95197 NCOR1P3-201ENST00000420479 303 ntBASIC2.26□□□□□ -2.05
RTN3O95197 AL603825.1-201ENST00000438481 80 ntBASIC2.26□□□□□ -2.05
RTN3O95197 MTND2P29-201ENST00000438595 412 ntBASIC2.26□□□□□ -2.05
RTN3O95197 SNRPEP8-201ENST00000442866 260 ntBASIC2.26□□□□□ -2.05
RTN3O95197 AC009237.7-201ENST00000447357 229 ntBASIC2.26□□□□□ -2.05
RTN3O95197 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.26□□□□□ -2.05
RTN3O95197 RN7SKP210-201ENST00000459176 261 ntBASIC2.26□□□□□ -2.05
RTN3O95197 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.26□□□□□ -2.05
RTN3O95197 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.26□□□□□ -2.05
RTN3O95197 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.26□□□□□ -2.05
RTN3O95197 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.26□□□□□ -2.05
RTN3O95197 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.26□□□□□ -2.05
RTN3O95197 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
RTN3O95197 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTN3O95197 RNU6-595P-201ENST00000363944 107 ntBASIC2.25□□□□□ -2.05
RTN3O95197 RNU6-1283P-201ENST00000365314 105 ntBASIC2.25□□□□□ -2.05
RTN3O95197 SNORA64-201ENST00000384674 134 ntBASIC2.25□□□□□ -2.05
RTN3O95197 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
RTN3O95197 AC138393.2-201ENST00000414742 246 ntBASIC2.25□□□□□ -2.05
RTN3O95197 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.25□□□□□ -2.05
RTN3O95197 PDCL2P1-201ENST00000419302 352 ntBASIC2.25□□□□□ -2.05
RTN3O95197 HMGN2P3-201ENST00000433603 273 ntBASIC2.25□□□□□ -2.05
RTN3O95197 HMGN2P5-201ENST00000436882 273 ntBASIC2.25□□□□□ -2.05
RTN3O95197 AC098614.3-201ENST00000438957 440 ntBASIC2.25□□□□□ -2.05
RTN3O95197 RNU1-131P-201ENST00000458943 161 ntBASIC2.25□□□□□ -2.05
RTN3O95197 AC103851.1-201ENST00000506833 274 ntBASIC2.25□□□□□ -2.05
RTN3O95197 RNU7-175P-201ENST00000515915 61 ntBASIC2.25□□□□□ -2.05
RTN3O95197 SNORA20.3-201ENST00000516880 132 ntBASIC2.25□□□□□ -2.05
RTN3O95197 Y_RNA.708-201ENST00000516950 96 ntBASIC2.25□□□□□ -2.05
RTN3O95197 AL590705.4-201ENST00000532209 134 ntBASIC2.25□□□□□ -2.05
RTN3O95197 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.25□□□□□ -2.05
RTN3O95197 CYP2C61P-201ENST00000604072 290 ntBASIC2.25□□□□□ -2.05
RTN3O95197 RBM11P1-201ENST00000604951 799 ntBASIC2.25□□□□□ -2.05
RTN3O95197 ZNF204P-201ENST00000416749 2397 ntBASIC2.24□□□□□ -2.05
RTN3O95197 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.24□□□□□ -2.05
RTN3O95197 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RTN3O95197 Y_RNA.88-201ENST00000363029 99 ntBASIC2.24□□□□□ -2.05
RTN3O95197 RNU6-137P-201ENST00000363680 108 ntBASIC2.24□□□□□ -2.05
RTN3O95197 MIR597-201ENST00000384968 97 ntBASIC2.24□□□□□ -2.05
RTN3O95197 SNORA12.2-201ENST00000391040 156 ntBASIC2.24□□□□□ -2.05
RTN3O95197 Y_RNA.594-201ENST00000410373 140 ntBASIC2.24□□□□□ -2.05
RTN3O95197 RNU6-1050P-201ENST00000410388 107 ntBASIC2.24□□□□□ -2.05
RTN3O95197 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.24□□□□□ -2.05
RTN3O95197 AC007395.1-201ENST00000451333 677 ntBASIC2.24□□□□□ -2.05
RTN3O95197 MTCO3P8-201ENST00000453691 755 ntBASIC2.24□□□□□ -2.05
RTN3O95197 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.24□□□□□ -2.05
RTN3O95197 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
RTN3O95197 Y_RNA.673-201ENST00000516306 88 ntBASIC2.24□□□□□ -2.05
RTN3O95197 Y_RNA.691-201ENST00000516611 103 ntBASIC2.24□□□□□ -2.05
RTN3O95197 AP005660.1-201ENST00000522972 293 ntBASIC2.24□□□□□ -2.05
RTN3O95197 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
RTN3O95197 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.24□□□□□ -2.05
RTN3O95197 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.24□□□□□ -2.05
RTN3O95197 AL590240.4-201ENST00000616908 390 ntBASIC2.24□□□□□ -2.05
RTN3O95197 AC099654.5-201ENST00000636479 350 ntBASIC2.24□□□□□ -2.05
RTN3O95197 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RTN3O95197 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.24□□□□□ -2.05
RTN3O95197 Y_RNA.132-201ENST00000363421 102 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNA5SP99-201ENST00000364020 114 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNA5SP493-201ENST00000364115 91 ntBASIC2.23□□□□□ -2.05
RTN3O95197 Y_RNA.319-201ENST00000365138 92 ntBASIC2.23□□□□□ -2.05
RTN3O95197 SNORD81.2-201ENST00000365153 76 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNU6-245P-201ENST00000384020 107 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNU6-17P-201ENST00000384245 107 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNU6-18P-201ENST00000384527 107 ntBASIC2.23□□□□□ -2.05
RTN3O95197 MIR487A-201ENST00000385009 80 ntBASIC2.23□□□□□ -2.05
RTN3O95197 MIR549A-201ENST00000385268 96 ntBASIC2.23□□□□□ -2.05
RTN3O95197 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RTN3O95197 RNU6-482P-201ENST00000391068 107 ntBASIC2.23□□□□□ -2.05
RTN3O95197 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RTN3O95197 AL512604.1-201ENST00000404812 257 ntBASIC2.23□□□□□ -2.05
RTN3O95197 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.23□□□□□ -2.05
RTN3O95197 MIR1283-1-201ENST00000408494 87 ntBASIC2.23□□□□□ -2.05
RTN3O95197 AC096920.1-201ENST00000423991 241 ntBASIC2.23□□□□□ -2.05
RTN3O95197 AC139712.2-201ENST00000424302 339 ntBASIC2.23□□□□□ -2.05
RTN3O95197 MTND3P10-201ENST00000450967 341 ntBASIC2.23□□□□□ -2.05
RTN3O95197 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.23□□□□□ -2.05
RTN3O95197 RPL30P10-201ENST00000488148 337 ntBASIC2.23□□□□□ -2.05
RTN3O95197 MIR4753-201ENST00000585119 83 ntBASIC2.23□□□□□ -2.05
RTN3O95197 TPTEP1-208ENST00000636884 213 ntBASIC2.23□□□□□ -2.05
RTN3O95197 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.23□□□□□ -2.05
RTN3O95197 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms