Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3AO75631 C8orf59P1-201ENST00000429930 303 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RPS26P55-201ENST00000471178 356 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3AO75631 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.32□□□□□ -2.2
UPK3AO75631 Y_RNA.693-201ENST00000516641 110 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK3AO75631 MRPS36P4-201ENST00000534436 298 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3AO75631 SNORA77B-201ENST00000578179 125 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 PIGPP4-201ENST00000584447 307 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 RMST_3.1-201ENST00000611651 109 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 AC005562.2-201ENST00000618264 111 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK3AO75631 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK3AO75631 AL359697.1-201ENST00000624879 587 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 AC068205.3-201ENST00000636385 468 ntBASIC1.32□□□□□ -2.2
UPK3AO75631 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 RNU6-562P-201ENST00000362731 107 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 RNU4-13P-201ENST00000364019 141 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 Y_RNA.231-201ENST00000364358 102 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 RNU6-418P-201ENST00000384035 107 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 RNU6-968P-201ENST00000384076 107 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 MIR514A2-201ENST00000385131 88 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 MIR514A3-201ENST00000385132 88 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 MIR549A-201ENST00000385268 96 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPK3AO75631 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3AO75631 AC083904.1-201ENST00000487828 231 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK3AO75631 NBR2-204ENST00000587322 63 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 AC016727.2-201ENST00000603988 621 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 AC104458.1-201ENST00000608243 463 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 AC100821.1-201ENST00000523153 2479 ntBASIC1.31□□□□□ -2.2
UPK3AO75631 OR4G1P-203ENST00000641984 1631 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 RNU5B-2P-201ENST00000363036 113 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 Y_RNA.167-201ENST00000363735 109 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 RNU6-1286P-201ENST00000383871 107 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 RNU6-933P-201ENST00000384424 107 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
UPK3AO75631 RNU6-780P-201ENST00000391030 104 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 RNU6-174P-201ENST00000410406 106 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 RPL23AP36-201ENST00000413895 458 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC007098.1-201ENST00000420122 367 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 MTCO3P29-201ENST00000432119 779 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 snoU13.30-201ENST00000458951 104 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 FO393415.2-201ENST00000480085 343 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 MTCO1P29-201ENST00000496868 288 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC079140.2-201ENST00000506193 142 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3AO75631 RNU6-1041P-201ENST00000516254 102 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 Y_RNA.704-201ENST00000516851 102 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK3AO75631 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK3AO75631 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK3AO75631 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
UPK3AO75631 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK3AO75631 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AC146944.4-201ENST00000602697 718 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK3AO75631 FAM157A-202ENST00000615155 405 ntBASIC1.3□□□□□ -2.2
UPK3AO75631 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
UPK3AO75631 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK3AO75631 RNU1-96P-201ENST00000364163 162 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 RNU6-522P-201ENST00000364497 107 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 MIR300-201ENST00000401138 83 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 MIR450B-201ENST00000401182 78 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 MIR1283-1-201ENST00000408494 87 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 RNU2-16P-201ENST00000410712 136 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.29□□□□□ -2.2
UPK3AO75631 SEPT14P3-201ENST00000439401 183 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 AC004386.2-201ENST00000441858 148 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 AL732372.2-207ENST00000445840 183 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 MTND1P29-201ENST00000448112 647 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 SEPT14P2-201ENST00000453405 183 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 AC099513.1-201ENST00000490423 301 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 SEPT14P4-201ENST00000513445 186 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 RNU6-1281P-201ENST00000516223 105 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 Y_RNA.676-201ENST00000516393 96 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK3AO75631 FO082796.1-201ENST00000523795 183 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK3AO75631 MIR4753-201ENST00000585119 83 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 RNU6-89P-201ENST00000606519 100 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.29□□□□□ -2.2
UPK3AO75631 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
UPK3AO75631 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
UPK3AO75631 SNORD1A-201ENST00000364968 72 ntBASIC1.28□□□□□ -2.2
UPK3AO75631 Y_RNA.559-201ENST00000384686 107 ntBASIC1.28□□□□□ -2.2
UPK3AO75631 RNU4-62P-201ENST00000410125 130 ntBASIC1.28□□□□□ -2.2
UPK3AO75631 RPL30P13-201ENST00000418873 348 ntBASIC1.28□□□□□ -2.2
UPK3AO75631 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms