Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RN7SKP287-201ENST00000516546 266 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU6-902P-201ENST00000517212 91 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.06□□□□□ -2.24
NPHP4O75161 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 CYP4A27P-201ENST00000567218 190 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC025449.1-201ENST00000603896 529 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AP001836.1-201ENST00000604675 523 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC093424.1-201ENST00000604999 338 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU6-85P-201ENST00000605989 107 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 AL360219.1-201ENST00000610230 366 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NPHP4O75161 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
NPHP4O75161 AC092268.1-201ENST00000342691 405 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 SNORD114-2-201ENST00000363953 78 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNU1-96P-201ENST00000364163 162 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RNY3P10-201ENST00000384764 102 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 SNORD73A-201ENST00000386062 65 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 MIR1197-201ENST00000408818 88 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC133104.1-201ENST00000429100 218 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AL358934.1-201ENST00000432346 324 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC112492.4-201ENST00000456549 352 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC016925.1-201ENST00000458303 298 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 RPL31P3-201ENST00000458430 332 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 snoU13.6-201ENST00000458785 104 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.06□□□□□ -2.24
NPHP4O75161 AC008628.2-201ENST00000502605 298 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.06□□□□□ -2.24
NPHP4O75161 CTHRC1P1-201ENST00000605383 469 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AL078604.3-201ENST00000615580 211 ntBASIC1.06□□□□□ -2.24
NPHP4O75161 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.05□□□□□ -2.24
NPHP4O75161 RNU6-1026P-201ENST00000384465 108 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 RNU6-360P-201ENST00000390944 104 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.05□□□□□ -2.24
NPHP4O75161 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.05□□□□□ -2.24
NPHP4O75161 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.05□□□□□ -2.24
NPHP4O75161 CETN4P-201ENST00000432407 469 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.05□□□□□ -2.24
NPHP4O75161 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.05□□□□□ -2.24
NPHP4O75161 RPS23P5-201ENST00000495419 428 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC079140.2-201ENST00000506193 142 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.05□□□□□ -2.24
NPHP4O75161 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.05□□□□□ -2.24
NPHP4O75161 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
NPHP4O75161 DEFB131C-201ENST00000528817 165 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AP002963.1-201ENST00000530590 184 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.05□□□□□ -2.24
NPHP4O75161 AC069114.2-201ENST00000604699 304 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC087683.2-201ENST00000611384 326 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC126177.8-201ENST00000618339 1015 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 AC009161.2-201ENST00000624626 138 ntBASIC1.05□□□□□ -2.24
NPHP4O75161 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NPHP4O75161 MIR549A-201ENST00000385268 96 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 RNU6-1093P-201ENST00000391194 107 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 RNU6-903P-201ENST00000391270 109 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AC060773.1-201ENST00000421698 310 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.04□□□□□ -2.24
NPHP4O75161 AL445567.1-201ENST00000439121 144 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AL031667.1-201ENST00000440222 725 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.04□□□□□ -2.24
NPHP4O75161 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.04□□□□□ -2.24
NPHP4O75161 OR2AQ1P-201ENST00000451972 200 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 RNU6-496P-201ENST00000516145 99 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 SUB1P2-201ENST00000556401 297 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AP003465.2-201ENST00000602571 373 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 7SK.7-201ENST00000603504 247 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AC008536.2-201ENST00000607284 349 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 AC009229.3-201ENST00000608056 282 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
NPHP4O75161 AC091931.1-201ENST00000623488 728 ntBASIC1.04□□□□□ -2.24
NPHP4O75161 FGF7P2-201ENST00000332473 296 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 RNA5SP347-201ENST00000362445 119 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 RNU1-76P-201ENST00000362903 159 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 Y_RNA.132-201ENST00000363421 102 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 MRPL35P1-201ENST00000404272 572 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 ARL5AP1-201ENST00000418991 388 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 MTCYBP8-201ENST00000422855 651 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AC012306.1-201ENST00000423267 114 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AL365203.2-201ENST00000423444 196 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 USP9YP28-201ENST00000435142 589 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AC027119.1-201ENST00000440877 241 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.03□□□□□ -2.24
NPHP4O75161 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AC105417.1-201ENST00000514691 285 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 RNU6-323P-201ENST00000521915 107 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.03□□□□□ -2.24
NPHP4O75161 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.03□□□□□ -2.24
NPHP4O75161 AC005668.1-201ENST00000571142 476 ntBASIC1.03□□□□□ -2.24
NPHP4O75161 MIR3937-201ENST00000580135 106 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms