Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RNU6-1041P-201ENST00000516254 102 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 RNU6-612P-201ENST00000516909 102 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 RNU6-323P-201ENST00000521915 107 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 AL391646.1-201ENST00000603860 190 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 AC121247.2-201ENST00000604776 136 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 AC063944.3-201ENST00000609969 533 ntBASIC1.22□□□□□ -2.21
KLHL41O60662 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KLHL41O60662 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KLHL41O60662 RNU1-96P-201ENST00000364163 162 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 RNU6-418P-201ENST00000384035 107 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 RNU6-1103P-201ENST00000384150 107 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.21□□□□□ -2.22
KLHL41O60662 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
KLHL41O60662 AC090960.1-201ENST00000421072 306 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.21□□□□□ -2.22
KLHL41O60662 MTCO2P18-201ENST00000457151 658 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 snoU13.27-201ENST00000459278 104 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.21□□□□□ -2.22
KLHL41O60662 AC091435.1-201ENST00000505442 584 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 SNORA14.1-201ENST00000516113 141 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.21□□□□□ -2.22
KLHL41O60662 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 MIR4424-201ENST00000585257 86 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 CTHRC1P1-201ENST00000605383 469 ntBASIC1.21□□□□□ -2.22
KLHL41O60662 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.21□□□□□ -2.22
KLHL41O60662 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.2□□□□□ -2.22
KLHL41O60662 AC027514.1-201ENST00000588561 1603 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 RNU6-562P-201ENST00000362731 107 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 RNU6-227P-201ENST00000362865 103 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 Y_RNA.381-201ENST00000365666 102 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 SNORA75-201ENST00000384158 137 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 MTCO2P19-201ENST00000427513 598 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 HMGN2P9-201ENST00000476875 229 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 DEFB131C-201ENST00000528817 165 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 AC087683.1-201ENST00000591187 441 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 AC073648.5-201ENST00000603502 305 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 MIR3976-201ENST00000606807 139 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 AC007684.1-201ENST00000609671 477 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 AL158063.1-201ENST00000615349 536 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
KLHL41O60662 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
KLHL41O60662 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
KLHL41O60662 RNU1-22P-201ENST00000363334 158 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 MIR300-201ENST00000401138 83 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AL353193.1-201ENST00000421444 268 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL41O60662 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHL41O60662 RNU6-956P-201ENST00000458868 103 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 RPS29P27-201ENST00000463711 170 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC067942.3-201ENST00000512025 362 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC025465.4-201ENST00000513422 638 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 RNU6-189P-201ENST00000516120 101 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 RNA5SP102-201ENST00000516865 106 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 RNU6-856P-201ENST00000516959 98 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC016256.1-201ENST00000547971 354 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL41O60662 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.19□□□□□ -2.22
KLHL41O60662 AC064836.2-201ENST00000609491 462 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 AC012676.2-201ENST00000619258 186 ntBASIC1.19□□□□□ -2.22
KLHL41O60662 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL41O60662 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL41O60662 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
KLHL41O60662 RNU6-42P-201ENST00000384165 107 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AL117342.1-201ENST00000404861 406 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 MIR1283-1-201ENST00000408494 87 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 MTND3P9-201ENST00000429526 346 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AL606489.2-201ENST00000433886 234 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 TPTE2P5-203ENST00000458118 728 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 MTCO3P38-201ENST00000468910 766 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 RPS3AP17-201ENST00000472594 777 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.18□□□□□ -2.22
KLHL41O60662 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KLHL41O60662 RNA5SP384-201ENST00000516615 116 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.18□□□□□ -2.22
KLHL41O60662 AL512310.8-201ENST00000550183 120 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.18□□□□□ -2.22
KLHL41O60662 AC008147.4-201ENST00000617570 1204 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 AP000770.2-201ENST00000623694 100 ntBASIC1.18□□□□□ -2.22
KLHL41O60662 Y_RNA.1-201ENST00000352915 104 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 COX6CP10-201ENST00000416832 224 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHL41O60662 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.17□□□□□ -2.22
KLHL41O60662 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 AC011406.1-201ENST00000512440 370 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 RNU6-1038P-201ENST00000516516 104 ntBASIC1.17□□□□□ -2.22
KLHL41O60662 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms