Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.42□□□□□ -2.48
SSSCA1O60232 MTATP6P16-201ENST00000434543 526 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 AC114878.1-201ENST00000441166 358 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 TPT1P7-201ENST00000458300 517 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 RNA5SP330-201ENST00000517096 96 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.42□□□□□ -2.48
SSSCA1O60232 TMF1P1-201ENST00000576058 373 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.42□□□□□ -2.48
SSSCA1O60232 AC092104.1-201ENST00000497346 1441 ntBASIC-0.42□□□□□ -2.48
SSSCA1O60232 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
SSSCA1O60232 AP000568.1-201ENST00000282964 442 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 RNA5SP325-201ENST00000363756 130 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AL139396.1-201ENST00000421137 167 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.43□□□□□ -2.48
SSSCA1O60232 MED13P1-201ENST00000428342 171 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 MTCO2P7-201ENST00000446518 666 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AP000542.1-201ENST00000448473 371 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 SNORD4A-201ENST00000459174 72 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AC007547.1-201ENST00000462177 490 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AC036111.3-201ENST00000526389 112 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 DEFB131D-201ENST00000526803 184 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.43□□□□□ -2.48
SSSCA1O60232 MIR3923-201ENST00000579521 83 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 AL445435.1-201ENST00000604232 665 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 BCRP9-201ENST00000605312 388 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.43□□□□□ -2.48
SSSCA1O60232 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
SSSCA1O60232 RNU6-777P-201ENST00000364265 104 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 RNU4-41P-201ENST00000364426 143 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 MIR196A2-201ENST00000385189 110 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 SNORA75.6-201ENST00000391318 127 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 MRPL42P3-201ENST00000401492 326 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC005534.2-201ENST00000431047 433 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.44□□□□□ -2.48
SSSCA1O60232 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.44□□□□□ -2.48
SSSCA1O60232 LRRC6P1-201ENST00000532188 885 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC104072.1-201ENST00000568817 668 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 MIR3612-201ENST00000579753 87 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC008752.3-201ENST00000588113 712 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC146944.4-201ENST00000602697 718 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 MIR8076-201ENST00000611401 83 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 Pinc.1-201ENST00000616452 154 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC067863.3-201ENST00000624172 122 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 AC103706.2-201ENST00000638080 240 ntBASIC-0.44□□□□□ -2.48
SSSCA1O60232 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 MIR489-201ENST00000384923 84 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 RNU6-127P-201ENST00000390897 107 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 SNORD111-201ENST00000408139 94 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 MIR1185-1-201ENST00000408598 86 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 MTND4LP11-201ENST00000422184 280 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 HSFY7P-201ENST00000432672 318 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 HSFY8P-201ENST00000437934 318 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC093019.1-201ENST00000443135 252 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.45□□□□□ -2.48
SSSCA1O60232 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 snoU13.21-201ENST00000459368 105 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.45□□□□□ -2.48
SSSCA1O60232 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.45□□□□□ -2.48
SSSCA1O60232 AP003716.2-201ENST00000528260 108 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC090517.1-201ENST00000569307 266 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC004987.4-201ENST00000603383 338 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 RPL17P51-201ENST00000605218 238 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 AC006001.4-201ENST00000622243 395 ntBASIC-0.45□□□□□ -2.48
SSSCA1O60232 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
SSSCA1O60232 RNU6-369P-201ENST00000362515 102 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 RNU6-46P-201ENST00000383860 107 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 RNU6-378P-201ENST00000384324 107 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 MIR610-201ENST00000385139 96 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 CDK8P2-201ENST00000415020 547 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC016909.1-201ENST00000415916 166 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 HMGN2P22-201ENST00000427588 175 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.46□□□□□ -2.48
SSSCA1O60232 AL353997.1-201ENST00000432936 108 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC244670.1-201ENST00000436879 112 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC092436.3-201ENST00000511788 257 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 RNU1-142P-201ENST00000516682 145 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 MIR3124-201ENST00000582636 67 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC005176.2-201ENST00000596933 147 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.46□□□□□ -2.48
SSSCA1O60232 AC122133.1-201ENST00000613964 233 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 MIR6755-201ENST00000619993 66 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 U6.108-201ENST00000637764 58 ntBASIC-0.46□□□□□ -2.48
SSSCA1O60232 MIR1-1-201ENST00000362147 71 ntBASIC-0.47□□□□□ -2.48
SSSCA1O60232 SNORD115-24-201ENST00000363528 82 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms