Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIR4424-201ENST00000585257 86 ntBASIC1.07□□□□□ -2.24
RNF13O43567 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.07□□□□□ -2.24
RNF13O43567 AL391262.2-201ENST00000622466 494 ntBASIC1.07□□□□□ -2.24
RNF13O43567 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
RNF13O43567 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RNF13O43567 MIR378A-201ENST00000362177 66 ntBASIC1.06□□□□□ -2.24
RNF13O43567 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
RNF13O43567 SNORA33-201ENST00000363664 130 ntBASIC1.06□□□□□ -2.24
RNF13O43567 RNU5A-6P-201ENST00000384136 116 ntBASIC1.06□□□□□ -2.24
RNF13O43567 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
RNF13O43567 RNA5SP219-201ENST00000390940 113 ntBASIC1.06□□□□□ -2.24
RNF13O43567 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
RNF13O43567 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
RNF13O43567 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF13O43567 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF13O43567 AC007215.1-201ENST00000464893 276 ntBASIC1.06□□□□□ -2.24
RNF13O43567 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
RNF13O43567 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
RNF13O43567 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.06□□□□□ -2.24
RNF13O43567 MIR4298-201ENST00000584380 73 ntBASIC1.06□□□□□ -2.24
RNF13O43567 AC023043.2-201ENST00000589678 1026 ntBASIC1.06□□□□□ -2.24
RNF13O43567 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.06□□□□□ -2.24
RNF13O43567 AP000907.4-201ENST00000604143 237 ntBASIC1.06□□□□□ -2.24
RNF13O43567 AC091931.1-201ENST00000623488 728 ntBASIC1.06□□□□□ -2.24
RNF13O43567 MTND4P5-201ENST00000435821 1374 ntBASIC1.06□□□□□ -2.24
RNF13O43567 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
RNF13O43567 RNA5SP259-201ENST00000365541 109 ntBASIC1.05□□□□□ -2.24
RNF13O43567 MIR549A-201ENST00000385268 96 ntBASIC1.05□□□□□ -2.24
RNF13O43567 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
RNF13O43567 MTCO2P18-201ENST00000457151 658 ntBASIC1.05□□□□□ -2.24
RNF13O43567 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.05□□□□□ -2.24
RNF13O43567 FGF7P1-201ENST00000582820 288 ntBASIC1.05□□□□□ -2.24
RNF13O43567 AC004223.2-201ENST00000590309 544 ntBASIC1.05□□□□□ -2.24
RNF13O43567 AC040904.1-201ENST00000590850 223 ntBASIC1.05□□□□□ -2.24
RNF13O43567 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
RNF13O43567 Z99497.2-201ENST00000603634 310 ntBASIC1.05□□□□□ -2.24
RNF13O43567 RNU1-124P-201ENST00000363861 145 ntBASIC1.04□□□□□ -2.24
RNF13O43567 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
RNF13O43567 RNU6-968P-201ENST00000384076 107 ntBASIC1.04□□□□□ -2.24
RNF13O43567 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RNF13O43567 AL606923.1-201ENST00000406616 190 ntBASIC1.04□□□□□ -2.24
RNF13O43567 AC004866.1-201ENST00000411748 78 ntBASIC1.04□□□□□ -2.24
RNF13O43567 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.04□□□□□ -2.24
RNF13O43567 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
RNF13O43567 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF13O43567 MTND3P9-201ENST00000429526 346 ntBASIC1.04□□□□□ -2.24
RNF13O43567 MTCO3P8-201ENST00000453691 755 ntBASIC1.04□□□□□ -2.24
RNF13O43567 RNU6-189P-201ENST00000516120 101 ntBASIC1.04□□□□□ -2.24
RNF13O43567 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.04□□□□□ -2.24
RNF13O43567 AC087854.1-201ENST00000519706 414 ntBASIC1.04□□□□□ -2.24
RNF13O43567 CENPUP1-201ENST00000526649 1202 ntBASIC1.04□□□□□ -2.24
RNF13O43567 SCOCP1-201ENST00000554676 349 ntBASIC1.04□□□□□ -2.24
RNF13O43567 AC087683.1-201ENST00000591187 441 ntBASIC1.04□□□□□ -2.24
RNF13O43567 SNRPGP20-201ENST00000604477 205 ntBASIC1.04□□□□□ -2.24
RNF13O43567 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.04□□□□□ -2.24
RNF13O43567 AC027335.2-201ENST00000624030 375 ntBASIC1.04□□□□□ -2.24
RNF13O43567 RNU6-82P-201ENST00000363970 107 ntBASIC1.03□□□□□ -2.24
RNF13O43567 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
RNF13O43567 RNU6-417P-201ENST00000384712 107 ntBASIC1.03□□□□□ -2.24
RNF13O43567 RPL21P1-201ENST00000399532 476 ntBASIC1.03□□□□□ -2.24
RNF13O43567 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF13O43567 MTCO3P38-201ENST00000468910 766 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC093852.1-201ENST00000503587 266 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF13O43567 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.03□□□□□ -2.24
RNF13O43567 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
RNF13O43567 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.03□□□□□ -2.24
RNF13O43567 AP000942.3-201ENST00000603702 160 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC064836.2-201ENST00000609491 462 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC103705.1-201ENST00000619013 241 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC006001.4-201ENST00000622243 395 ntBASIC1.03□□□□□ -2.24
RNF13O43567 AC139792.3-201ENST00000623525 224 ntBASIC1.03□□□□□ -2.24
RNF13O43567 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
RNF13O43567 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RNF13O43567 RNU6-1305P-201ENST00000364353 104 ntBASIC1.02□□□□□ -2.25
RNF13O43567 RNU6-1329P-201ENST00000365664 107 ntBASIC1.02□□□□□ -2.25
RNF13O43567 RNU6-1103P-201ENST00000384150 107 ntBASIC1.02□□□□□ -2.25
RNF13O43567 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RNF13O43567 MIR1253-201ENST00000408273 105 ntBASIC1.02□□□□□ -2.25
RNF13O43567 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.02□□□□□ -2.25
RNF13O43567 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.02□□□□□ -2.25
RNF13O43567 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
RNF13O43567 RNU7-57P-201ENST00000459540 60 ntBASIC1.02□□□□□ -2.25
RNF13O43567 RPL39P38-201ENST00000467018 153 ntBASIC1.02□□□□□ -2.25
RNF13O43567 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
RNF13O43567 RNU6-1069P-201ENST00000516612 133 ntBASIC1.02□□□□□ -2.25
RNF13O43567 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
RNF13O43567 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
RNF13O43567 MIR6078-201ENST00000611069 100 ntBASIC1.02□□□□□ -2.25
RNF13O43567 AC021506.2-201ENST00000612354 169 ntBASIC1.02□□□□□ -2.25
RNF13O43567 AC008873.1-201ENST00000625051 138 ntBASIC1.02□□□□□ -2.25
RNF13O43567 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
RNF13O43567 RNA5SP109-201ENST00000391010 116 ntBASIC1.01□□□□□ -2.25
RNF13O43567 RNA5SP323-201ENST00000391094 133 ntBASIC1.01□□□□□ -2.25
RNF13O43567 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
RNF13O43567 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
RNF13O43567 MIR320B2-201ENST00000408479 138 ntBASIC1.01□□□□□ -2.25
RNF13O43567 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.01□□□□□ -2.25
RNF13O43567 RPS6P15-201ENST00000431996 751 ntBASIC1.01□□□□□ -2.25
RNF13O43567 DYNLT3P2-201ENST00000442517 295 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms