Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.56□□□□□ -2
MSI1O43347 USP9YP16-201ENST00000430287 407 ntBASIC2.56□□□□□ -2
MSI1O43347 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.56□□□□□ -2
MSI1O43347 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.56□□□□□ -2
MSI1O43347 USP9YP23-201ENST00000455085 407 ntBASIC2.56□□□□□ -2
MSI1O43347 AC073901.1-201ENST00000462471 408 ntBASIC2.56□□□□□ -2
MSI1O43347 AC140059.1-201ENST00000489238 361 ntBASIC2.56□□□□□ -2
MSI1O43347 AC145146.1-201ENST00000496370 254 ntBASIC2.56□□□□□ -2
MSI1O43347 RNU6-911P-201ENST00000516523 104 ntBASIC2.56□□□□□ -2
MSI1O43347 RNU6-58P-201ENST00000517143 103 ntBASIC2.56□□□□□ -2
MSI1O43347 Y_RNA.720-201ENST00000517166 92 ntBASIC2.56□□□□□ -2
MSI1O43347 AC113195.1-201ENST00000579952 141 ntBASIC2.56□□□□□ -2
MSI1O43347 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
MSI1O43347 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
MSI1O43347 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.56□□□□□ -2
MSI1O43347 AC136443.5-201ENST00000603741 370 ntBASIC2.56□□□□□ -2
MSI1O43347 AL049779.4-201ENST00000604500 156 ntBASIC2.56□□□□□ -2
MSI1O43347 PCGEM1.1-201ENST00000613431 131 ntBASIC2.56□□□□□ -2
MSI1O43347 AL138825.1-201ENST00000618587 192 ntBASIC2.56□□□□□ -2
MSI1O43347 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
MSI1O43347 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
MSI1O43347 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
MSI1O43347 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
MSI1O43347 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
MSI1O43347 Y_RNA.455-201ENST00000384230 98 ntBASIC2.55□□□□□ -2
MSI1O43347 MIR10B-201ENST00000385011 110 ntBASIC2.55□□□□□ -2
MSI1O43347 SNORA46.1-201ENST00000391069 153 ntBASIC2.55□□□□□ -2
MSI1O43347 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.55□□□□□ -2
MSI1O43347 AC003685.2-201ENST00000422795 395 ntBASIC2.55□□□□□ -2
MSI1O43347 EIF1P2-201ENST00000428233 350 ntBASIC2.55□□□□□ -2
MSI1O43347 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.55□□□□□ -2
MSI1O43347 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.55□□□□□ -2
MSI1O43347 snoU13.26-201ENST00000459452 105 ntBASIC2.55□□□□□ -2
MSI1O43347 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.55□□□□□ -2
MSI1O43347 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.55□□□□□ -2
MSI1O43347 RNU6-1114P-201ENST00000516022 107 ntBASIC2.55□□□□□ -2
MSI1O43347 Y_RNA.673-201ENST00000516306 88 ntBASIC2.55□□□□□ -2
MSI1O43347 RNU6-764P-201ENST00000516396 105 ntBASIC2.55□□□□□ -2
MSI1O43347 SCARNA3-201ENST00000517097 143 ntBASIC2.55□□□□□ -2
MSI1O43347 AC040926.1-201ENST00000530195 238 ntBASIC2.55□□□□□ -2
MSI1O43347 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.55□□□□□ -2
MSI1O43347 AL713866.2-201ENST00000603579 219 ntBASIC2.55□□□□□ -2
MSI1O43347 AC016727.2-201ENST00000603988 621 ntBASIC2.55□□□□□ -2
MSI1O43347 AC069528.2-201ENST00000624849 1991 ntBASIC2.55□□□□□ -2
MSI1O43347 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
MSI1O43347 RNU6-1159P-201ENST00000362933 107 ntBASIC2.54□□□□□ -2
MSI1O43347 Y_RNA.153-201ENST00000363615 91 ntBASIC2.54□□□□□ -2
MSI1O43347 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
MSI1O43347 Y_RNA.389-201ENST00000383924 113 ntBASIC2.54□□□□□ -2
MSI1O43347 SNORA67.4-201ENST00000384688 142 ntBASIC2.54□□□□□ -2
MSI1O43347 MIR628-201ENST00000385229 95 ntBASIC2.54□□□□□ -2
MSI1O43347 RNU6-159P-201ENST00000391080 106 ntBASIC2.54□□□□□ -2
MSI1O43347 RNU6-1093P-201ENST00000391194 107 ntBASIC2.54□□□□□ -2
MSI1O43347 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
MSI1O43347 U6atac.2-201ENST00000408644 118 ntBASIC2.54□□□□□ -2
MSI1O43347 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.54□□□□□ -2
MSI1O43347 U8.20-201ENST00000459445 131 ntBASIC2.54□□□□□ -2
MSI1O43347 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
MSI1O43347 AC007215.1-201ENST00000464893 276 ntBASIC2.54□□□□□ -2
MSI1O43347 AC105245.1-201ENST00000581934 244 ntBASIC2.54□□□□□ -2
MSI1O43347 AC125232.2-201ENST00000592457 143 ntBASIC2.54□□□□□ -2
MSI1O43347 AL078596.1-201ENST00000624856 447 ntBASIC2.54□□□□□ -2
MSI1O43347 MIR7157-201ENST00000635801 60 ntBASIC2.54□□□□□ -2
MSI1O43347 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
MSI1O43347 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
MSI1O43347 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
MSI1O43347 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
MSI1O43347 AC026241.1-201ENST00000517873 2142 ntBASIC2.53□□□□□ -2
MSI1O43347 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MSI1O43347 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
MSI1O43347 SNORD14.1-201ENST00000365609 90 ntBASIC2.53□□□□□ -2
MSI1O43347 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
MSI1O43347 SNORA12-201ENST00000391162 147 ntBASIC2.53□□□□□ -2
MSI1O43347 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
MSI1O43347 WARS2P1-201ENST00000429678 537 ntBASIC2.53□□□□□ -2
MSI1O43347 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.53□□□□□ -2
MSI1O43347 AC096638.1-201ENST00000444678 216 ntBASIC2.53□□□□□ -2
MSI1O43347 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
MSI1O43347 MTND5P22-201ENST00000458380 195 ntBASIC2.53□□□□□ -2
MSI1O43347 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
MSI1O43347 AC093852.1-201ENST00000503587 266 ntBASIC2.53□□□□□ -2
MSI1O43347 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
MSI1O43347 Y_RNA.721-201ENST00000517207 102 ntBASIC2.53□□□□□ -2
MSI1O43347 AC022868.1-201ENST00000517767 391 ntBASIC2.53□□□□□ -2
MSI1O43347 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
MSI1O43347 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.53□□□□□ -2
MSI1O43347 AL442163.3-201ENST00000554110 156 ntBASIC2.53□□□□□ -2
MSI1O43347 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.53□□□□□ -2
MSI1O43347 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.53□□□□□ -2
MSI1O43347 AC124312.5-201ENST00000604451 268 ntBASIC2.53□□□□□ -2
MSI1O43347 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.53□□□□□ -2
MSI1O43347 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2.01
MSI1O43347 RNA5SP361-201ENST00000362686 118 ntBASIC2.52□□□□□ -2.01
MSI1O43347 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
MSI1O43347 RNU6-137P-201ENST00000363680 108 ntBASIC2.52□□□□□ -2.01
MSI1O43347 Y_RNA.424-201ENST00000384063 103 ntBASIC2.52□□□□□ -2.01
MSI1O43347 Y_RNA.459-201ENST00000384251 102 ntBASIC2.52□□□□□ -2.01
MSI1O43347 RNU6-318P-201ENST00000384283 103 ntBASIC2.52□□□□□ -2.01
MSI1O43347 RNU6-541P-201ENST00000384709 110 ntBASIC2.52□□□□□ -2.01
MSI1O43347 MIR548F4-201ENST00000408515 105 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms