Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 U2.2-201ENST00000616535 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.3-201ENST00000617785 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.19-201ENST00000618602 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 RNU2-1-201ENST00000618664 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.6-201ENST00000619225 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.5-201ENST00000619465 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 U2.10-201ENST00000620268 191 ntBASIC3.25□□□□□ -1.89
SHOXO15266 AC068724.3-201ENST00000625906 87 ntBASIC3.25□□□□□ -1.89
SHOXO15266 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.25□□□□□ -1.89
SHOXO15266 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHOXO15266 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SHOXO15266 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOXO15266 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOXO15266 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.24□□□□□ -1.89
SHOXO15266 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOXO15266 Y_RNA.75-201ENST00000362927 97 ntBASIC3.24□□□□□ -1.89
SHOXO15266 RNU6-103P-201ENST00000363686 107 ntBASIC3.24□□□□□ -1.89
SHOXO15266 RNU6-271P-201ENST00000363858 105 ntBASIC3.24□□□□□ -1.89
SHOXO15266 Y_RNA.182-201ENST00000363880 111 ntBASIC3.24□□□□□ -1.89
SHOXO15266 RNU6-234P-201ENST00000365229 104 ntBASIC3.24□□□□□ -1.89
SHOXO15266 SNORD50.2-201ENST00000365465 70 ntBASIC3.24□□□□□ -1.89
SHOXO15266 RNU6-1274P-201ENST00000384557 107 ntBASIC3.24□□□□□ -1.89
SHOXO15266 SNORA8.3-201ENST00000384679 139 ntBASIC3.24□□□□□ -1.89
SHOXO15266 MICF-203ENST00000432679 129 ntBASIC3.24□□□□□ -1.89
SHOXO15266 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.24□□□□□ -1.89
SHOXO15266 U8.19-201ENST00000459095 133 ntBASIC3.24□□□□□ -1.89
SHOXO15266 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHOXO15266 RAC1P5-201ENST00000512182 576 ntBASIC3.24□□□□□ -1.89
SHOXO15266 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.24□□□□□ -1.89
SHOXO15266 RN7SL703P-201ENST00000578485 302 ntBASIC3.24□□□□□ -1.89
SHOXO15266 MAPK10-322ENST00000641485 4530 ntBASIC3.24□□□□□ -1.89
SHOXO15266 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SHOXO15266 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
SHOXO15266 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SHOXO15266 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHOXO15266 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHOXO15266 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
SHOXO15266 Y_RNA.272-201ENST00000364696 102 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC068538.1-201ENST00000376856 336 ntBASIC3.23□□□□□ -1.89
SHOXO15266 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHOXO15266 SNORA26.5-201ENST00000391215 123 ntBASIC3.23□□□□□ -1.89
SHOXO15266 MTCO2P33-201ENST00000402100 465 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC004975.1-201ENST00000428733 208 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.23□□□□□ -1.89
SHOXO15266 GOT2P5-201ENST00000433995 546 ntBASIC3.23□□□□□ -1.89
SHOXO15266 RPS4XP2-201ENST00000458402 793 ntBASIC3.23□□□□□ -1.89
SHOXO15266 RNU7-57P-201ENST00000459540 60 ntBASIC3.23□□□□□ -1.89
SHOXO15266 RPL27AP5-201ENST00000469428 449 ntBASIC3.23□□□□□ -1.89
SHOXO15266 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.23□□□□□ -1.89
SHOXO15266 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHOXO15266 AC026402.1-201ENST00000513642 170 ntBASIC3.23□□□□□ -1.89
SHOXO15266 RN7SKP209-201ENST00000516888 304 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC109329.2-201ENST00000519658 482 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC018630.3-201ENST00000542637 96 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.23□□□□□ -1.89
SHOXO15266 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.23□□□□□ -1.89
SHOXO15266 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHOXO15266 AP001485.1-201ENST00000604799 199 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC025754.2-201ENST00000606491 432 ntBASIC3.23□□□□□ -1.89
SHOXO15266 AC019176.2-201ENST00000611579 315 ntBASIC3.23□□□□□ -1.89
SHOXO15266 MIR6716-201ENST00000613413 80 ntBASIC3.23□□□□□ -1.89
SHOXO15266 Y_RNA.802-201ENST00000614892 130 ntBASIC3.23□□□□□ -1.89
SHOXO15266 snoZ196.1-201ENST00000625269 89 ntBASIC3.23□□□□□ -1.89
SHOXO15266 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.22□□□□□ -1.89
SHOXO15266 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SHOXO15266 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
SHOXO15266 RNA5SP479-201ENST00000364858 117 ntBASIC3.22□□□□□ -1.89
SHOXO15266 CD24P4-201ENST00000382840 243 ntBASIC3.22□□□□□ -1.89
SHOXO15266 MIR873-201ENST00000401120 77 ntBASIC3.22□□□□□ -1.89
SHOXO15266 U6atac.2-201ENST00000408644 118 ntBASIC3.22□□□□□ -1.89
SHOXO15266 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
SHOXO15266 AL691449.1-201ENST00000426570 421 ntBASIC3.22□□□□□ -1.89
SHOXO15266 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SHOXO15266 RPS12P18-201ENST00000442381 270 ntBASIC3.22□□□□□ -1.89
SHOXO15266 AC146507.2-201ENST00000460608 476 ntBASIC3.22□□□□□ -1.89
SHOXO15266 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.22□□□□□ -1.89
SHOXO15266 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
SHOXO15266 Y_RNA.797-201ENST00000515977 94 ntBASIC3.22□□□□□ -1.89
SHOXO15266 SNORA31.9-201ENST00000516429 84 ntBASIC3.22□□□□□ -1.89
SHOXO15266 MIR5688-201ENST00000580619 83 ntBASIC3.22□□□□□ -1.89
SHOXO15266 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
SHOXO15266 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHOXO15266 MIR7151-201ENST00000617477 60 ntBASIC3.22□□□□□ -1.89
SHOXO15266 AC002064.3-201ENST00000623448 346 ntBASIC3.22□□□□□ -1.89
SHOXO15266 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHOXO15266 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
SHOXO15266 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
SHOXO15266 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHOXO15266 RNU6-1205P-201ENST00000363625 106 ntBASIC3.21□□□□□ -1.9
SHOXO15266 RNU6-704P-201ENST00000364162 103 ntBASIC3.21□□□□□ -1.9
SHOXO15266 SNORD31B-201ENST00000364977 69 ntBASIC3.21□□□□□ -1.9
SHOXO15266 Y_RNA.310-201ENST00000365063 113 ntBASIC3.21□□□□□ -1.9
SHOXO15266 RNA5SP240-201ENST00000365355 128 ntBASIC3.21□□□□□ -1.9
SHOXO15266 Y_RNA.398-201ENST00000383952 99 ntBASIC3.21□□□□□ -1.9
SHOXO15266 Y_RNA.580-201ENST00000391004 95 ntBASIC3.21□□□□□ -1.9
SHOXO15266 RNU6-381P-201ENST00000391259 108 ntBASIC3.21□□□□□ -1.9
SHOXO15266 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOXO15266 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOXO15266 AC010154.1-201ENST00000425857 269 ntBASIC3.21□□□□□ -1.9
SHOXO15266 AL135790.2-201ENST00000437701 267 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms