Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC007215.1-201ENST00000464893 276 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.65□□□□□ -1.99
NPC1O15118 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.65□□□□□ -1.99
NPC1O15118 AC091144.1-201ENST00000519573 138 ntBASIC2.65□□□□□ -1.99
NPC1O15118 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NPC1O15118 GNAI2P1-201ENST00000541815 315 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AC090617.3-201ENST00000573670 475 ntBASIC2.65□□□□□ -1.99
NPC1O15118 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
NPC1O15118 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AC040896.1-201ENST00000613819 479 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AL138825.1-201ENST00000618587 192 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AL590808.1-201ENST00000618696 141 ntBASIC2.65□□□□□ -1.99
NPC1O15118 AC138305.3-201ENST00000624988 240 ntBASIC2.65□□□□□ -1.99
NPC1O15118 MIR4272-201ENST00000635924 64 ntBASIC2.65□□□□□ -1.99
NPC1O15118 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPC1O15118 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NPC1O15118 RNU5F-3P-201ENST00000363767 117 ntBASIC2.64□□□□□ -1.99
NPC1O15118 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
NPC1O15118 AC117470.1-201ENST00000381974 330 ntBASIC2.64□□□□□ -1.99
NPC1O15118 Y_RNA.557-201ENST00000384680 107 ntBASIC2.64□□□□□ -1.99
NPC1O15118 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NPC1O15118 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
NPC1O15118 RN7SKP284-201ENST00000411002 343 ntBASIC2.64□□□□□ -1.99
NPC1O15118 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.64□□□□□ -1.99
NPC1O15118 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.64□□□□□ -1.99
NPC1O15118 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.64□□□□□ -1.99
NPC1O15118 CHEK2P4-201ENST00000450340 246 ntBASIC2.64□□□□□ -1.99
NPC1O15118 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.64□□□□□ -1.99
NPC1O15118 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.64□□□□□ -1.99
NPC1O15118 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.64□□□□□ -1.99
NPC1O15118 AC006600.1-201ENST00000572529 153 ntBASIC2.64□□□□□ -1.99
NPC1O15118 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
NPC1O15118 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
NPC1O15118 AC022432.1-201ENST00000595739 310 ntBASIC2.64□□□□□ -1.99
NPC1O15118 SNORD58B-201ENST00000607313 66 ntBASIC2.64□□□□□ -1.99
NPC1O15118 U2.1-201ENST00000618978 145 ntBASIC2.64□□□□□ -1.99
NPC1O15118 FO624990.1-201ENST00000636373 85 ntBASIC2.64□□□□□ -1.99
NPC1O15118 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPC1O15118 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPC1O15118 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NPC1O15118 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
NPC1O15118 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
NPC1O15118 Y_RNA.422-201ENST00000384054 114 ntBASIC2.63□□□□□ -1.99
NPC1O15118 MIR628-201ENST00000385229 95 ntBASIC2.63□□□□□ -1.99
NPC1O15118 RNU6-159P-201ENST00000391080 106 ntBASIC2.63□□□□□ -1.99
NPC1O15118 RNU1-139P-201ENST00000391307 165 ntBASIC2.63□□□□□ -1.99
NPC1O15118 MRPL42P3-201ENST00000401492 326 ntBASIC2.63□□□□□ -1.99
NPC1O15118 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
NPC1O15118 RNU6-1114P-201ENST00000516022 107 ntBASIC2.63□□□□□ -1.99
NPC1O15118 RNU6-475P-201ENST00000516073 104 ntBASIC2.63□□□□□ -1.99
NPC1O15118 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
NPC1O15118 MIR2355-201ENST00000517199 87 ntBASIC2.63□□□□□ -1.99
NPC1O15118 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
NPC1O15118 HSBP1P1-201ENST00000555205 166 ntBASIC2.63□□□□□ -1.99
NPC1O15118 VN1R91P-201ENST00000594377 169 ntBASIC2.63□□□□□ -1.99
NPC1O15118 AC016727.2-201ENST00000603988 621 ntBASIC2.63□□□□□ -1.99
NPC1O15118 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.63□□□□□ -1.99
NPC1O15118 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NPC1O15118 ZNF204P-201ENST00000416749 2397 ntBASIC2.63□□□□□ -1.99
NPC1O15118 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.62□□□□□ -1.99
NPC1O15118 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NPC1O15118 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPC1O15118 AC005592.1-201ENST00000566527 1640 ntBASIC2.62□□□□□ -1.99
NPC1O15118 Y_RNA.80-201ENST00000362996 102 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RNU6-611P-201ENST00000384276 104 ntBASIC2.62□□□□□ -1.99
NPC1O15118 Y_RNA.485-201ENST00000384395 102 ntBASIC2.62□□□□□ -1.99
NPC1O15118 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NPC1O15118 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
NPC1O15118 WARS2P1-201ENST00000429678 537 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.62□□□□□ -1.99
NPC1O15118 U8.22-201ENST00000459141 133 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.62□□□□□ -1.99
NPC1O15118 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.62□□□□□ -1.99
NPC1O15118 SCARNA15.1-201ENST00000516384 125 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RNU6-911P-201ENST00000516523 104 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RNU6-965P-201ENST00000516721 96 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RNU6-667P-201ENST00000517186 102 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.62□□□□□ -1.99
NPC1O15118 UBL5P4-201ENST00000562584 236 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC006504.6-201ENST00000590142 199 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC116312.1-201ENST00000606841 314 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AL132822.1-201ENST00000617063 513 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC005562.2-201ENST00000618264 111 ntBASIC2.62□□□□□ -1.99
NPC1O15118 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.62□□□□□ -1.99
NPC1O15118 MTND4P1-201ENST00000457501 1466 ntBASIC2.62□□□□□ -1.99
NPC1O15118 BX322639.1-202ENST00000423987 2213 ntBASIC2.62□□□□□ -1.99
NPC1O15118 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
NPC1O15118 ZNF72P-201ENST00000425869 1908 ntBASIC2.62□□□□□ -1.99
NPC1O15118 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPC1O15118 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
NPC1O15118 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
NPC1O15118 RNU6-280P-201ENST00000364145 104 ntBASIC2.61□□□□□ -1.99
NPC1O15118 RNU1-91P-201ENST00000364746 163 ntBASIC2.61□□□□□ -1.99
NPC1O15118 RNU6-234P-201ENST00000365229 104 ntBASIC2.61□□□□□ -1.99
NPC1O15118 RNU6-639P-201ENST00000384074 107 ntBASIC2.61□□□□□ -1.99
NPC1O15118 MIR10B-201ENST00000385011 110 ntBASIC2.61□□□□□ -1.99
NPC1O15118 MIR549A-201ENST00000385268 96 ntBASIC2.61□□□□□ -1.99
NPC1O15118 AL357139.1-201ENST00000407792 426 ntBASIC2.61□□□□□ -1.99
NPC1O15118 AC007064.1-201ENST00000412238 351 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms