Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP000907.4-201ENST00000604143 237 ntBASIC1.65□□□□□ -2.15
NPIPA2E9PIF3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.65□□□□□ -2.15
NPIPA2E9PIF3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 MIR340-201ENST00000362125 95 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 RNU1-76P-201ENST00000362903 159 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 SNORD31B-201ENST00000364977 69 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 SNORD116-11-201ENST00000383882 92 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 RNU6-784P-201ENST00000384330 106 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 MIR517A-201ENST00000385001 87 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 HMGB1P18-201ENST00000438801 619 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC130509.1-201ENST00000464158 433 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC087477.1-201ENST00000465747 340 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 RPL23AP75-201ENST00000491601 451 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 MTND1P5-201ENST00000517906 940 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 POLR3GP2-201ENST00000588366 668 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC005786.1-201ENST00000588553 154 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 RPL17P51-201ENST00000605218 238 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 AC019193.3-201ENST00000609144 554 ntBASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.64□□□□□ -2.15
NPIPA2E9PIF3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC027514.1-201ENST00000588561 1603 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 Y_RNA.6-201ENST00000362350 114 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 SNORD50.1-201ENST00000362987 71 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 RNU6-831P-201ENST00000384548 107 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 RNU6-306P-201ENST00000384617 107 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 MTND1P34-201ENST00000438556 671 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC004386.2-201ENST00000441858 148 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC011352.1-201ENST00000512300 793 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC107393.1-201ENST00000512403 346 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 SNORA59B-202ENST00000578183 701 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 MIR5006-201ENST00000583027 110 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC010900.2-201ENST00000604508 210 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 AC005562.2-201ENST00000618264 111 ntBASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NPIPA2E9PIF3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 RNU6-418P-201ENST00000384035 107 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC009161.1-201ENST00000417306 376 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 MTCO3P8-201ENST00000453691 755 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 MTCO2P30-201ENST00000503662 364 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 SNORA44.1-201ENST00000517031 108 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
NPIPA2E9PIF3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 RNA5SP100-201ENST00000410903 110 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 RNA5SP59-201ENST00000410922 110 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 Z82188.1-201ENST00000436709 154 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 AC016925.1-201ENST00000458303 298 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 RPS29P25-201ENST00000481709 171 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 AC093913.1-201ENST00000614178 329 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 AC068137.4-201ENST00000638485 296 ntBASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.61□□□□□ -2.15
NPIPA2E9PIF3 Y_RNA.157-201ENST00000363638 102 ntBASIC1.6□□□□□ -2.15
NPIPA2E9PIF3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
NPIPA2E9PIF3 AC004866.1-201ENST00000411748 78 ntBASIC1.6□□□□□ -2.15
NPIPA2E9PIF3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.6□□□□□ -2.15
NPIPA2E9PIF3 NCOR1P3-201ENST00000420479 303 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms