Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR549A-201ENST00000385268 96 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 CDK8P2-201ENST00000415020 547 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 MTCO2P34-201ENST00000421994 607 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 CALM2P4-201ENST00000430810 426 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC079395.1-201ENST00000510981 262 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-377P-201ENST00000515965 102 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 RNA5SP216-201ENST00000516111 123 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 RNA5SP227-201ENST00000516184 113 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC107934.1-201ENST00000522215 217 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AF235103.2-201ENST00000525753 346 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC123904.2-201ENST00000548059 300 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 MTND3P13-201ENST00000574391 343 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC023932.2-201ENST00000603176 175 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AL158042.1-201ENST00000605338 460 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AC064807.4-201ENST00000607201 407 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 AL359075.3-201ENST00000613288 217 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC-0.17□□□□□ -2.44
TCRBV3S1A0A5B6 MIR18A-201ENST00000362310 71 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 RNY4P16-201ENST00000364768 94 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 U8.16-201ENST00000391279 133 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 MIR208B-201ENST00000401172 77 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-57P-201ENST00000411348 103 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 MTND4P3-201ENST00000417829 541 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 TPT1P7-201ENST00000458300 517 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AC091874.1-201ENST00000511402 339 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 RNA5SP220-201ENST00000516298 104 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 MIR8070-201ENST00000616510 88 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AC007742.2-201ENST00000618226 398 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AC092634.7-201ENST00000621022 103 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AL078595.3-201ENST00000623815 1166 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 AC004808.1-201ENST00000627671 721 ntBASIC-0.18□□□□□ -2.44
TCRBV3S1A0A5B6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 SNORA63.3-201ENST00000362682 132 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-428P-201ENST00000362942 107 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-224P-201ENST00000384055 107 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-424P-201ENST00000384367 105 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 MIR573-201ENST00000384964 99 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 MIR1253-201ENST00000408273 105 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AL663109.1-201ENST00000411498 844 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 RPS3AP3-201ENST00000411933 242 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AC073261.1-201ENST00000429409 121 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 SNAP23P1-201ENST00000433229 246 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AC013470.1-201ENST00000453438 462 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AC079382.1-201ENST00000493346 557 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 LRRC34P2-201ENST00000514850 553 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AL139286.2-201ENST00000606838 396 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 AC068880.4-201ENST00000623082 495 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 SNORA43.4-201ENST00000629559 138 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 MIR6079-201ENST00000635807 62 ntBASIC-0.19□□□□□ -2.44
TCRBV3S1A0A5B6 RNA5SP517-201ENST00000364724 117 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-25P-201ENST00000383873 107 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-48P-201ENST00000384161 107 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-15P-201ENST00000384534 107 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-29P-201ENST00000384637 107 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 RPS29P13-201ENST00000402041 169 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AL354692.1-201ENST00000423044 315 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC093019.1-201ENST00000443135 252 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC067940.1-201ENST00000458411 300 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC008628.2-201ENST00000502605 298 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC016632.1-201ENST00000503994 196 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC010486.2-201ENST00000505572 483 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 MTCO3P27-201ENST00000514397 196 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 SNORD111.1-201ENST00000516421 86 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC022784.5-201ENST00000522241 437 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC008521.1-201ENST00000587471 187 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 MTND3P19-201ENST00000603825 345 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC072039.2-201ENST00000608883 439 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC015726.2-201ENST00000620112 122 ntBASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.2□□□□□ -2.44
TCRBV3S1A0A5B6 SNORD111-201ENST00000408139 94 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AC106883.1-201ENST00000418805 562 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AC090960.1-201ENST00000421072 306 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AP000870.1-201ENST00000472927 406 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 RNU6-567P-201ENST00000516746 107 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 MIR5692A1-201ENST00000580523 69 ntBASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.21□□□□□ -2.44
TCRBV3S1A0A5B6 AL117336.2-201ENST00000602435 335 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms