Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC097478.2-201ENST00000610572 514 ntBASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.26□□□□□ -2.45
TRAV1-2A0A0B4J238 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-562P-201ENST00000362731 107 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 SNORD32A-201ENST00000364805 84 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 RNY1P4-201ENST00000384595 115 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AL354692.1-201ENST00000423044 315 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 ELOCP24-201ENST00000456370 334 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AC074133.1-201ENST00000515696 183 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 RNA5SP436-201ENST00000516020 115 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 OR8K2P-201ENST00000524645 927 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 DEFB130C-202ENST00000530001 230 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AC112693.2-201ENST00000556538 232 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AL391840.1-201ENST00000571144 367 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR1273G-201ENST00000577677 100 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 VN1R87P-201ENST00000596706 487 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AC146944.4-201ENST00000602697 718 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 Z99289.3-201ENST00000605586 594 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AC122133.1-201ENST00000613964 233 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 RMST_2.1-201ENST00000617263 136 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 uc_338.34-201ENST00000617467 174 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AP002782.1-201ENST00000623107 614 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 AC091925.1-201ENST00000623204 462 ntBASIC-0.27□□□□□ -2.45
TRAV1-2A0A0B4J238 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 SNORD114-5-201ENST00000362928 70 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 U3.4-201ENST00000363352 213 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-700P-201ENST00000391043 107 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR1284-201ENST00000408337 120 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 RNU6-293P-201ENST00000411259 106 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AC019070.1-201ENST00000415008 1024 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 CDK8P2-201ENST00000415020 547 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MTND3P17-201ENST00000416968 344 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 PDCL2P1-201ENST00000419302 352 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MTND1P20-201ENST00000430341 950 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AL133396.1-201ENST00000432048 687 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MTND4LP16-201ENST00000440828 295 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 SNRPGP7-201ENST00000469016 106 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 RPS3AP17-201ENST00000472594 777 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR5697-201ENST00000578045 78 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR4753-201ENST00000585119 83 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AC011712.1-201ENST00000588959 234 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR98-201ENST00000606724 119 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 MIR8087-201ENST00000612745 78 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AL359075.3-201ENST00000613288 217 ntBASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.28□□□□□ -2.45
TRAV1-2A0A0B4J238 AC121333.1-201ENST00000567488 2709 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD118-201ENST00000363593 134 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-468P-201ENST00000384003 109 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-514P-201ENST00000384208 107 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-424P-201ENST00000384367 105 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU2-62P-201ENST00000410868 191 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AL663109.1-201ENST00000411498 844 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC016909.1-201ENST00000415916 166 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AL139396.1-201ENST00000421137 167 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 MTATP6P16-201ENST00000434543 526 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RPS25P9-201ENST00000435591 252 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 SEPT7P4-201ENST00000437076 306 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC093850.1-201ENST00000454121 251 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC010469.2-201ENST00000496412 480 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 LRRC34P2-201ENST00000514850 553 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD111.1-201ENST00000516421 86 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU7-128P-201ENST00000517247 62 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RPL23AP91-201ENST00000569211 455 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 MTND3P19-201ENST00000603825 345 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC104695.3-201ENST00000604052 296 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC064807.4-201ENST00000607201 407 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC093875.1-201ENST00000623688 504 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 AC073544.1-201ENST00000600110 1595 ntBASIC-0.29□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-716P-201ENST00000365621 103 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR549A-201ENST00000385268 96 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 U8.16-201ENST00000391279 133 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 MIR1253-201ENST00000408273 105 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 RNU6-994P-201ENST00000410507 111 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 SNORD71-201ENST00000411292 86 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 CALM2P4-201ENST00000430810 426 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AP000870.1-201ENST00000472927 406 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AC079382.1-201ENST00000493346 557 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 Z99497.2-201ENST00000603634 310 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 BCRP9-201ENST00000605312 388 ntBASIC-0.3□□□□□ -2.46
TRAV1-2A0A0B4J238 AL158042.1-201ENST00000605338 460 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms