Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNU6-966P-201ENST00000516479 104 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 SNORA31.16-201ENST00000516773 139 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 SNORD19.2-201ENST00000516978 73 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 MIR3945-201ENST00000581853 98 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 AC006023.1-201ENST00000603944 259 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 SNRPGP20-201ENST00000604477 205 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 AC013412.1-201ENST00000610687 192 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 MIR486-1-201ENST00000612171 68 ntBASIC3.41□□□□□ -1.86
HCFC2Q9Y5Z7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC2Q9Y5Z7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.4□□□□□ -1.86
HCFC2Q9Y5Z7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
HCFC2Q9Y5Z7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC2Q9Y5Z7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HCFC2Q9Y5Z7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.23-201ENST00000362496 106 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-1117P-201ENST00000384525 104 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AL139095.1-201ENST00000404326 391 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AL138878.1-201ENST00000405131 347 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 RNU5E-9P-201ENST00000411164 104 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC009963.1-201ENST00000417265 157 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 YPEL5P1-201ENST00000419731 367 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC024067.1-201ENST00000426199 223 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 IFNA11P-201ENST00000446352 526 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC090525.1-201ENST00000479116 478 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 SUMO2P18-201ENST00000518873 252 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 MIR2682-201ENST00000580305 110 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 UBL5P2-201ENST00000583788 219 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 RPL12P50-201ENST00000603116 116 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AL078604.3-201ENST00000615580 211 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 AC091932.3-201ENST00000624223 323 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 MIR3674-201ENST00000636576 68 ntBASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCFC2Q9Y5Z7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.7-201ENST00000362352 102 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 SNORA7.4-201ENST00000384249 137 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AIG1P1-201ENST00000503376 148 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 MIR2114-201ENST00000516645 80 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 MIR3609-201ENST00000582661 80 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AL008718.3-201ENST00000610217 321 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AF117829.1-206ENST00000621883 3802 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AC092628.2-201ENST00000622492 339 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 MIR3199-2-201ENST00000636243 86 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 SNORD98-201ENST00000636377 67 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 AC002546.1-201ENST00000588041 2504 ntBASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCFC2Q9Y5Z7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 SNORA18.3-201ENST00000384122 132 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 RNU1-89P-201ENST00000384592 164 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 snoU13.14-201ENST00000459372 104 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 RNU1-61P-201ENST00000516107 151 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-155P-201ENST00000516347 100 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 AC009127.3-201ENST00000570531 403 ntBASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
HCFC2Q9Y5Z7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 Y_RNA.343-201ENST00000365354 112 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-1264P-201ENST00000383891 107 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 RNU6-748P-201ENST00000384648 107 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 EI24P2-201ENST00000397776 1076 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 RNA5SP475-201ENST00000410568 110 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AC096649.2-201ENST00000416186 393 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AL161651.1-201ENST00000440882 223 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 RNU7-170P-201ENST00000459303 61 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 HMGB3P3-201ENST00000510526 400 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 RNU2-12P-201ENST00000517216 168 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 MIR3923-201ENST00000579521 83 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 AC073308.1-201ENST00000623696 305 ntBASIC3.37□□□□□ -1.87
HCFC2Q9Y5Z7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 257.2 ms