Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC005042.3-201ENST00000453230 174 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC022441.3-201ENST00000605737 136 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC107871.2-201ENST00000612894 502 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 AC006001.4-201ENST00000622243 395 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 MIR6500-201ENST00000622700 86 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.32□□□□□ -1.72
GTF3C3Q9Y5Q9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 RNA5SP509-201ENST00000364577 119 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 MIR192-201ENST00000384915 110 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 SUMO1P2-201ENST00000452524 304 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 MYL12BP1-201ENST00000569826 507 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 AL109918.3-201ENST00000603072 338 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 AC083809.1-201ENST00000615051 472 ntBASIC4.31□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU4-90P-201ENST00000362773 141 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-1266P-201ENST00000362794 105 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU1-109P-201ENST00000383960 147 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RNA5SP229-201ENST00000410809 99 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 AC016769.2-201ENST00000414815 475 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 AC008134.1-201ENST00000420943 193 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RPS29P6-201ENST00000438196 145 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-221P-201ENST00000459541 99 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RN7SL323P-201ENST00000494712 295 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 MIR4443-201ENST00000585052 53 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 AC091932.3-201ENST00000624223 323 ntBASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
GTF3C3Q9Y5Q9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 Y_RNA.222-201ENST00000364264 102 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-418P-201ENST00000384035 107 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-213P-201ENST00000384051 104 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 MIR585-201ENST00000384887 94 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU2-54P-201ENST00000410299 190 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 ELOCP19-201ENST00000411919 318 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 AC087441.2-201ENST00000529141 262 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 AC073657.2-201ENST00000605661 303 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 AC013412.1-201ENST00000610687 192 ntBASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
GTF3C3Q9Y5Q9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 AC092593.1-201ENST00000515413 1815 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-806P-201ENST00000365147 105 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 MIR568-201ENST00000385036 95 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 RNU6-57P-201ENST00000411348 103 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 RPS29P33-201ENST00000456717 146 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 RPS29P22-201ENST00000472363 168 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 AC008749.1-201ENST00000597650 306 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 AP000346.3-201ENST00000622821 210 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 AL161431.1-201ENST00000618966 4205 ntBASIC4.28□□□□□ -1.72
GTF3C3Q9Y5Q9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.331-201ENST00000365267 102 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR29C-201ENST00000385231 88 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORA40.19-201ENST00000390846 128 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.581-201ENST00000391017 97 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-121P-201ENST00000410525 99 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 MTCO1P44-201ENST00000441935 243 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 snoU13.1-201ENST00000459157 104 ntBASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.27□□□□□ -1.73
GTF3C3Q9Y5Q9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORD81.1-201ENST00000363064 77 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.446-201ENST00000384178 104 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.452-201ENST00000384202 108 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-160P-201ENST00000384591 107 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR887-201ENST00000401258 79 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 RPL19P1-201ENST00000411635 428 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 AC009963.1-201ENST00000417265 157 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 RPS29P26-201ENST00000477483 171 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 AC004817.2-201ENST00000561794 651 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 AP000942.4-201ENST00000604811 241 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR6867-201ENST00000610636 67 ntBASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
GTF3C3Q9Y5Q9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms